@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1833: (2018-01-20 )
MLYFMYRIIERRLSMKKKLVFPNLFWWGAASSGPQTEGQYGKVHENVMDYWFKTHPEDFFDNVGPLVASNFFHTYTEDFHLMKEIGVNSFRTSIQWSRLIKNLETGEPDPKGIAFYNAIIEEAKKNQMDLVMNLHHFDLPVELLQKYGGWESKHVVELFVKFAKTAFTCFGDKVHYWTTFNEPMVIPEAGYLYAFHYPNLKGKGKEAVQVIYNLNLASAKVIQLYRSLELDGKIGIILNLTPAYPRSNSPEDLEASRFTDDFFNKVFLNPAVKGTFPERLVKQLERDGVLWSHTEKELQLMKSNTVDFLGVNYYHPKRVQAQANPEEYQTPWMPDQYFKEYEWPERRMNPYRGWEIFPKAIYDIAMIVKEEYGNIPWFISENGMGVENEARFIDENGVIDDVYRIEFYEEHLRWLHKAIEEGSHCFGYHAWTAFDCWSWNNAYKNRYGFISVDLETQKRTIKSSGRWYRKVSDNNGFEVEIEE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BG6_A_3(4ZEP)
?
[Raw transfer]




BGC_A_2(4HZ8)
?
[Raw transfer]




BGC_A_2(4HZ7)
?
[Raw transfer]




BG6_B_7(4ZEP)
?
[Raw transfer]




NOJ_A_3(1OIM)
BGLA_THEMA
[Raw transfer]




NOY_A_4(2J75)
BGLA_THEMA
[Raw transfer]




CTS_B_6(2CBU)
BGLA_THEMA
[Raw transfer]




IFL_A_3(1UZ1)
BGLA_THEMA
[Raw transfer]




BGP_B_14(4ZEN)
?
[Raw transfer]




CGB_A_3(2CBV)
BGLA_THEMA
[Raw transfer]




CTS_A_3(2CBU)
BGLA_THEMA
[Raw transfer]




BGC_A_3(4PTX)
?
[Raw transfer]




OXZ_A_3(1W3J)
BGLA_THEMA
[Raw transfer]




AZF_B_7(2J7H)
BGLA_THEMA
[Raw transfer]




SRT_A_24(3CMJ)
?
[Raw transfer]




BGC_B_5(4PTX)
?
[Raw transfer]




YLL_B_6(2JAL)
BGLA_THEMA
[Raw transfer]




IFM_B_4(1OIF)
BGLA_THEMA
[Raw transfer]




TRS_A_2(3W53)
?
[Raw transfer]




G2F_A_3(4PTW)
?
[Raw transfer]




GOL_A_2(4HZ6)
?
[Raw transfer]




G2F_B_5(4PTW)
?
[Raw transfer]




3 PsiBlast_PDB 99.5853% -30 - C2 -5FOO - ? -
25 PsiBlast_CBE 99.4653% -31 - C2 -5FOO - ? -
24 PsiBlast_CBE 98.1653% -31 - C2 -5FOO - ? -
2 PsiBlast_PDB 97.4853% -29 - C2 -4B3L - ? -
1 PsiBlast_PDB 96.4253% -27 - C2 -4B3K - ? -
9 PsiBlast_PDB 78.5833% -11 - C2 -4HZ6 0.9 ?
11 PsiBlast_PDB 78.4533% -13 - C2 -4HZ8 3.8 ?
10 PsiBlast_PDB 78.4433% -12 - C2 -4HZ7 3.7 ?
12 PsiBlast_PDB 77.7933% -12 - C2 -3CMJ 3.3 ?
102 PsiBlast_CBE 74.9931% 11 - C2 -4ZE5 - ? -
129 Fugue 74.2432% -10 - C2 -1E4I - BGLA_PAEPO -
103 PsiBlast_CBE 74.0931% 12 - C2 -4ZE5 - ? -
104 PsiBlast_CBE 74.0831% 12 - C2 -4ZE5 - ? -
105 PsiBlast_CBE 73.7531% 11 - C2 -4ZE5 - ? -
84 PsiBlast_CBE 73.5832% 0 - C2 -1UYQ - BGLA_PAEPO -
83 PsiBlast_CBE 73.1132% 2 - C2 -1TR1 - BGLA_PAEPO -
95 PsiBlast_CBE 72.9532% 23 - C2 -4ZEH - ? -
86 PsiBlast_CBE 72.8431% -1 - C2 -1BGG - BGLA_PAEPO -
87 PsiBlast_CBE 72.7331% 0 - C2 -1BGG - BGLA_PAEPO -
80 PsiBlast_CBE 72.6132% 3 - C2 -1TR1 - BGLA_PAEPO -
7 PsiBlast_PDB 69.0233% 17 - C2 -4PTX 4.2 ?
27 PsiBlast_CBE 68.5933% 16 - C2 -4PTX 3.4 ?