@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1846: (2018-01-21 )
MKNLRIALISKDWIWKVRKRNKEMTKRIPNLQVALDHSDLQGAIKAAVSVGQEVDIIEAGTVCLLQVGSELAEVLRSLFPDKIIVADTKCADAGGTVAKNNAVRGADWMTCICCATIPTMEAALKAIKTERGERGEIQIELYGDWTFEQAQLWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIDMGFRVSVTGGLDVDTLKLFEGVDVFTFIAGRGITEAADPAGAARAFKDEIKRIWG

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TX4_B_6(1Q6L)
ULAD_ECOLI
[Raw transfer]




TX4_B_5(1SO3)
ULAD_ECOLI
[Raw transfer]




TX4_B_5(1SO6)
ULAD_ECOLI
[Raw transfer]




TX4_A_6(1SO3)
ULAD_ECOLI
[Raw transfer]




LG6_A_6(1KW1)
ULAD_ECOLI
[Raw transfer]




TX4_A_5(1SO4)
ULAD_ECOLI
[Raw transfer]




TX4_A_6(1SO5)
ULAD_ECOLI
[Raw transfer]




LG6_B_5(1KW1)
ULAD_ECOLI
[Raw transfer]




TX4_B_6(1SO4)
ULAD_ECOLI
[Raw transfer]




TX4_A_5(1Q6L)
ULAD_ECOLI
[Raw transfer]




LXP_A_5(1Q6Q)
ULAD_ECOLI
[Raw transfer]




LG6_B_6(1Q6O)
ULAD_ECOLI
[Raw transfer]




LXP_B_6(1Q6Q)
ULAD_ECOLI
[Raw transfer]




TX4_B_5(1SO5)
ULAD_ECOLI
[Raw transfer]




5RP_A_3(1XBY)
ULAD_ECOLI
[Raw transfer]




5RP_D_6(3EXS)
?
[Raw transfer]




5RP_B_4(1XBV)
ULAD_ECOLI
[Raw transfer]




TX4_A_6(1SO6)
ULAD_ECOLI
[Raw transfer]




LX1_B_6(1XBZ)
ULAD_ECOLI
[Raw transfer]




5RP_B_4(1XBY)
ULAD_ECOLI
[Raw transfer]




LX1_B_6(1XBZ)
ULAD_ECOLI
[Raw transfer]




5RP_A_3(1XBV)
ULAD_ECOLI
[Raw transfer]




LX1_A_5(1Q6R)
ULAD_ECOLI
[Raw transfer]




LX1_A_5(1XBZ)
ULAD_ECOLI
[Raw transfer]




LX1_B_6(1Q6R)
ULAD_ECOLI
[Raw transfer]




5RP_B_4(1XBX)
ULAD_ECOLI
[Raw transfer]




HMS_A_3(1XBX)
ULAD_ECOLI
[Raw transfer]




GOL_B_13(3IEB)
?
[Raw transfer]




21 PsiBlast_CBE 89.6288%-121 - C4 -3EXS 4.4 ?
2 PsiBlast_PDB 88.4388%-125 - C4 -3EXS - ? -
3 PsiBlast_PDB 87.7188%-126 - C4 -3EXT - ? -
23 PsiBlast_CBE 87.0288%-127 - C4 -3EXS - ? -
22 PsiBlast_CBE 86.3388%-120 - C4 -3EXS - ? -
1 PsiBlast_PDB 83.8088% - - C4 -3EXR - ? -
49 HHSearch 81.7687% - - C4 -3EXR - ? -
48 HHSearch 78.2787% - - C4 -3EXR - ? -
27 PsiBlast_CBE 77.7648%-134 - C4 -1Q6O 5.0 ULAD_ECOLI
61 HHSearch 77.5647%-132 * C4 *1XBZ 4.7 ULAD_ECOLI
36 PsiBlast_CBE 77.3847%-133 - C4 -1XBZ 4.7 ULAD_ECOLI
24 PsiBlast_CBE 77.2848%-135 - C4 -1XBV 3.9 ULAD_ECOLI
9 PsiBlast_PDB 76.8448%-133 - C4 -1Q6R 4.4 ULAD_ECOLI
25 PsiBlast_CBE 76.4848%-131 - C4 -1Q6R 4.1 ULAD_ECOLI
32 PsiBlast_CBE 76.3147%-138 - C4 -1SO4 5.1 ULAD_ECOLI
31 PsiBlast_CBE 76.3147%-130 - C4 -1SO5 4.8 ULAD_ECOLI
12 PsiBlast_PDB 76.2347%-137 - C4 -1SO4 5.0 ULAD_ECOLI
11 PsiBlast_PDB 76.2147%-131 - C4 -1SO5 4.9 ULAD_ECOLI
33 PsiBlast_CBE 76.1347%-131 - C4 -1XBY 4.5 ULAD_ECOLI
28 PsiBlast_CBE 76.0448%-133 - C4 -1Q6L 4.8 ULAD_ECOLI
10 PsiBlast_PDB 76.0148%-130 - C4 -1XBV 4.1 ULAD_ECOLI
14 PsiBlast_PDB 76.0047%-129 - C4 -1SO3 4.7 ULAD_ECOLI
5 PsiBlast_PDB 75.9848%-135 - C4 -1KW1 4.8 ULAD_ECOLI
34 PsiBlast_CBE 75.7747%-139 - C4 -1SO3 4.9 ULAD_ECOLI
29 PsiBlast_CBE 75.7148%-134 - C4 -1KW1 4.6 ULAD_ECOLI
26 PsiBlast_CBE 75.6648%-133 - C4 -1Q6Q 4.7 ULAD_ECOLI
13 PsiBlast_PDB 75.5647%-130 - C4 -1XBY 4.7 ULAD_ECOLI
35 PsiBlast_CBE 75.5547%-138 - C4 -1SO6 5.0 ULAD_ECOLI
16 PsiBlast_PDB 75.4747%-134 - C4 -1XBX 4.6 ULAD_ECOLI
15 PsiBlast_PDB 75.4647%-133 - C4 -1SO6 4.0 ULAD_ECOLI
8 PsiBlast_PDB 75.3848%-137 - C4 -1Q6Q 4.7 ULAD_ECOLI
37 PsiBlast_CBE 75.1447%-134 - C4 -1XBX 4.4 ULAD_ECOLI
51 HHSearch 74.8741%-136 - C4 -3IEB 2.8 ?
6 PsiBlast_PDB 74.7848%-127 - C4 -1Q6L 4.7 ULAD_ECOLI
17 PsiBlast_PDB 74.4547%-132 - C4 -1XBZ 4.6 ULAD_ECOLI