@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1854: (2018-01-21 )
MTKTIAINAGSSSLKWQLYLMPEEKVLAKGLIERIGLKDSISTVKFDGRSEQQILDIENHIQAVKILLDDLIRFDIIKAYDEITGVGHRVVAGGEYFKESTVVEGDVLEKVEELSLLAPLHNPANAAGVRAFKELLPDITSVVVFDTSFHTSMPEKAYRYPLPTKYYTENKVRKYGAHGTSHQFVAGEAAKLLGRPLEDLKLITCHIGNGGSITAVKAGKSVDTSMGFTPLGGIMMGTRTGDIDPAIIPYLMQYTEDFNTPEDISRVLNRESGLLGVSANSSDMRDIEAAVAEGNHEASLAYEMYVDRIQKHIGQYLAVLNGADAIVFTAGVGENAESFRRDVISGISWFGCDVDDEKNVFGVTGDISTEAAKIRVLVIPTDEELVIARDVERLKK

Atome Classification :

(32 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B4P_A_2(2E1Z)
TDCD_SALTY
[Raw transfer]




ANP_A_2(4XH4)
TDCD_SALTY
[Raw transfer]




AQP_A_4(4FWN)
TDCD_SALTY
[Raw transfer]




B4P_A_2(2E20)
TDCD_SALTY
[Raw transfer]




ANP_A_2(4XH4)
TDCD_SALTY
[Raw transfer]




ATP_A_6(4FWM)
TDCD_SALTY
[Raw transfer]




ATP_A_6(4FWM)
TDCD_SALTY
[Raw transfer]




ANP_E_5(1X3N)
TDCD_SALTY
[Raw transfer]




GTP_A_4(4FWQ)
TDCD_SALTY
[Raw transfer]




ADP_F_6(1G99)
ACKA_METTE
[Raw transfer]




ADP_F_6(1G99)
ACKA_METTE
[Raw transfer]




ANP_A_5(4XH1)
TDCD_SALTY
[Raw transfer]




CTP_A_6(4FWS)
TDCD_SALTY
[Raw transfer]




ADP_C_3(1X3M)
TDCD_SALTY
[Raw transfer]




ADP_E_5(1G99)
ACKA_METTE
[Raw transfer]




GDP_A_4(4FWP)
TDCD_SALTY
[Raw transfer]




AMP_B_8(4IJN)
ACKA_MYCS2
[Raw transfer]




ANP_A_4(4XH5)
TDCD_SALTY
[Raw transfer]




AMP_A_4(4IJN)
ACKA_MYCS2
[Raw transfer]




APC_A_3(4IZ9)
ACKA_MYCA1
[Raw transfer]




ADP_E_5(1TUU)
ACKA_METTE
[Raw transfer]




AMP_A_3(4FWK)
TDCD_SALTY
[Raw transfer]




5GP_A_5(4FWO)
TDCD_SALTY
[Raw transfer]




C5P_A_4(4FWR)
TDCD_SALTY
[Raw transfer]




PIS_G_7(1TUU)
ACKA_METTE
[Raw transfer]




PGE_B_6(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




PGE_A_5(3R9P)
ACKA_MYCPA
[Raw transfer]




EDO_A_6(4IJN)
ACKA_MYCS2
[Raw transfer]




EDO_A_2(4FWL)
TDCD_SALTY
[Raw transfer]




EDO_A_2(4FWP)
TDCD_SALTY
[Raw transfer]




ACY_B_7(1TUY)
ACKA_METTE
[Raw transfer]




AF3_B_6(1TUY)
ACKA_METTE
[Raw transfer]




57 Fugue 82.7151% -10 - C7 -1G99 5.8 ACKA_METTE
35 PsiBlast_CBE 82.3939%-107 - C7 -4FWL 2.1 TDCD_SALTY
32 PsiBlast_CBE 82.0139%-107 - C7 -4FWP 6.0 TDCD_SALTY
4 PsiBlast_PDB 81.9550% -4 - C7 -2IIR - ACKA_THEMA -
18 PsiBlast_PDB 81.8939%-107 - C7 -4FWK 5.2 TDCD_SALTY
14 PsiBlast_PDB 81.7839%-106 - C7 -1X3N 5.8 TDCD_SALTY
12 PsiBlast_PDB 81.7539%-102 - C7 -4XH4 6.3 TDCD_SALTY
36 PsiBlast_CBE 81.5739%-104 - C7 -4XH5 6.6 TDCD_SALTY
16 PsiBlast_PDB 81.5339%-106 - C7 -2E1Z 9.3 TDCD_SALTY
34 PsiBlast_CBE 81.2939%-106 - C7 -4FWM 5.8 TDCD_SALTY
7 PsiBlast_PDB 81.2740% -94 - C7 -4IJN 2.6 ACKA_MYCS2
17 PsiBlast_PDB 81.0439%-104 - C7 -2E20 9.2 TDCD_SALTY
29 PsiBlast_CBE 80.7039%-103 - C7 -4FWS 5.7 TDCD_SALTY
27 PsiBlast_CBE 80.5640% -99 - C7 -4IJN 6.3 ACKA_MYCS2
20 PsiBlast_PDB 80.5439%-106 - C7 -4FWO 5.7 TDCD_SALTY
30 PsiBlast_CBE 80.4739%-102 - C7 -4FWR 4.1 TDCD_SALTY
13 PsiBlast_PDB 80.2639%-103 - C7 -1X3M 5.3 TDCD_SALTY
19 PsiBlast_PDB 80.2339%-100 - C7 -4FWN 7.2 TDCD_SALTY
33 PsiBlast_CBE 80.1139%-105 - C7 -4XH1 5.5 TDCD_SALTY
31 PsiBlast_CBE 79.5739%-104 - C7 -4FWQ 6.2 TDCD_SALTY
48 HHSearch 78.3250% 36 - C7 -1G99 6.5 ACKA_METTE
21 PsiBlast_CBE 77.8951% 34 - C7 -1G99 6.5 ACKA_METTE
22 PsiBlast_CBE 77.1351% 37 - C7 -1TUY 3.2 ACKA_METTE
23 PsiBlast_CBE 76.3551% 35 - C7 -1TUU 3.1 ACKA_METTE
47 HHSearch 76.2950% 34 - C7 -1TUU 5.8 ACKA_METTE
43 HHSearch 76.2740% -33 - C7 -4XH4 6.3 TDCD_SALTY
44 HHSearch 75.1240% -35 - C7 -4FWM 6.0 TDCD_SALTY
45 HHSearch 74.8843% -24 * C7 *3R9P 1.9 ACKA_MYCPA
8 PsiBlast_PDB 74.3141% -18 - C7 -3R9P 1.9 ACKA_MYCPA
42 HHSearch 73.4142% -7 - C7 -4IJN 6.4 ACKA_MYCS2
10 PsiBlast_PDB 73.2741% -14 - C7 -4IZ9 5.8 ACKA_MYCA1
28 PsiBlast_CBE 72.6741% -15 - C7 -3R9P 2.5 ACKA_MYCPA