@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1881: (2018-01-21 )
MSKDIRVRYAPSPTGLLHIGNARTALFNYLYARHHGGTFLIRIEDTDRKRHVEDGERSQLENLRWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERERQEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEFEGGNIGGDWIIQKKDGYPTYNFAVAIDDHDMQISHVIRGDDHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNTLQFIEDYRKKGYLPEAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFDQKKLDWMSNDYIKNADLETIFEMAKPFLEEAGRLTDKAEKLVELYKPQMKSVDEIIPLTDLFFSDFPELTEAEREVMTGETVPTVLEAFKAKLEAMTDDKFVTENIFPQIKAVQKETGIKGKNLFMPIRIAVSGEMHGPELPDTIFLLGREKSIQHIENMLKEISK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(1N75)
SYE_THET8
[Raw transfer]



GSU_A_2(3AFH)
SYE2_THEMA
[Raw transfer]



GSU_A_2(3AFH)
SYE2_THEMA
[Raw transfer]



ATP_A_4(1J09)
SYE_THET8
[Raw transfer]



GOL_B_11(5TGT)
SYE_PSEAE
[Raw transfer]



GLU_A_4(4GRI)
SYE_BORBU
[Raw transfer]



GLU_B_7(4GRI)
SYE_BORBU
[Raw transfer]



GLU_A_4(4GRI)
SYE_BORBU
[Raw transfer]



GLU_B_7(4GRI)
SYE_BORBU
[Raw transfer]



GLU_A_3(2CFO)
SYE_THEEB
[Raw transfer]



GLU_A_3(2CFO)
SYE_THEEB
[Raw transfer]



GLU_A_3(1J09)
SYE_THET8
[Raw transfer]



GLU_A_3(1J09)
SYE_THET8
[Raw transfer]



GLU_B_2(2CUZ)
SYE_THET8
[Raw transfer]
40 HHSearch 87.8641% -13 - C6 -2CFO 3.0 SYE_THEEB
41 HHSearch 87.8341% -13 - C6 -2CFO - SYE_THEEB -
1 PsiBlast_PDB 85.2641% -19 - C6 -2CFO 3.0 SYE_THEEB
39 HHSearch 80.6837% 15 - C6 -2CV0 - SYE_THET8 -
42 HHSearch 80.2643% 30 - C6 -2O5R - SYE1_THEMA -
2 PsiBlast_PDB 79.7040% 37 - C6 -2O5R - SYE1_THEMA -
24 PsiBlast_CBE 79.6934% 20 - C6 -4GRI 3.4 SYE_BORBU
14 PsiBlast_PDB 79.5237% 30 - C6 -2CV2 - SYE_THET8 -
10 PsiBlast_PDB 79.3737% 32 - C6 -1N78 - SYE_THET8 -
34 HHSearch 79.3534% 28 - C6 -2JA2 - SYE_MYCTU -
15 PsiBlast_PDB 79.2337% 29 - C6 -2DXI - SYE_THET8 -
38 HHSearch 79.1137% 18 - C6 -1J09 2.9 SYE_THET8
28 PsiBlast_CBE 79.0437% 34 - C6 -2CV0 - SYE_THET8 -
27 PsiBlast_CBE 78.8037% 34 - C6 -2CV1 - SYE_THET8 -
12 PsiBlast_PDB 78.7037% 30 - C6 -2CV0 - SYE_THET8 -
36 HHSearch 78.6434% 34 - C6 -4GRI 3.4 SYE_BORBU
25 PsiBlast_CBE 78.6337% 35 - C6 -2DXI - SYE_THET8 -
13 PsiBlast_PDB 78.5437% 33 - C6 -2CV1 - SYE_THET8 -
29 PsiBlast_CBE 78.2937% 35 - C6 -1N78 - SYE_THET8 -
26 PsiBlast_CBE 78.2537% 35 - C6 -2CV2 - SYE_THET8 -
7 PsiBlast_PDB 77.3837% 37 - C6 -1J09 7.0 SYE_THET8
37 HHSearch 77.3134% 28 - C6 -4GRI 3.5 SYE_BORBU
11 PsiBlast_PDB 77.0137% 34 - C6 -2CUZ 3.0 SYE_THET8
6 PsiBlast_PDB 76.9734% 20 - C6 -4GRI 3.5 SYE_BORBU
43 HHSearch 73.6939% 32 - C6 -3AFH 6.9 SYE2_THEMA
4 PsiBlast_PDB 69.9136% 24 - C6 -3AFH 6.9 SYE2_THEMA