@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1894: (2018-01-22 )
MKRYLQFWLVNLSVSLILIAGMALTWISKGIGLFLLALSLGQGGYWLFCLWKWEVAFETLHQPLLTSSEYFLEKGQEDLKSLAQYVSALKTKVSQQDQQYKDLAETMEVLLSHLTMGTFLVSAQGQMLLSSRSLPHYFPDVDGDISSLDDLKRMDIRNLVHQAFDQKTRLKQEVSGFHEGDLILEVTAVPVFSPTQSVEAVLVLLYDLTTIRTYEKLNLAFVSNASHELRTPVTSIKGFAETIKGMSAEEEALKDDFLDIIYKESLRLEHIVEHLLTLSKAQQMPIQWTTLSLAEFVQDLTQSLQPQLKKKDLQLKVQVPDDVTLVSDSQLLSQILLNLLSNAIRYTEQGGKIEVKTQKVNEGIKISVSDTGIGISQLEQDRIFERFYRVNKGRSRQTGGTGLGLAIVKELSQLLGGQVTVTSQLGRGSCFTIFLPNQSFAQD

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_3(4BIW)
CPXA_ECOLI
[Raw transfer]



ATP_A_3(4CB0)
CPXA_ECOLI
[Raw transfer]



ACP_A_3(5C93)
?
[Raw transfer]



ANP_B_7(4BIW)
CPXA_ECOLI
[Raw transfer]



ADP_A_7(3DGE)
?
[Raw transfer]



AN2_B_4(4U7O)
?
[Raw transfer]



AN2_A_3(4U7O)
?
[Raw transfer]



ADP_A_3(4JAS)
?
[Raw transfer]



ATP_A_5(5LFK)
?
[Raw transfer]



ADP_A_8(4JAV)
?
[Raw transfer]



ADP_A_8(4JAV)
?
[Raw transfer]



AN2_A_3(4U7O)
?
[Raw transfer]



ACP_B_7(5C93)
?
[Raw transfer]



ADP_A_2(2C2A)
?
[Raw transfer]



ADP_B_8(3DGE)
?
[Raw transfer]



ADP_A_2(2C2A)
?
[Raw transfer]



ADP_A_2(4JAU)
?
[Raw transfer]
47 Fugue 83.5225% - - C2 -4I5S - ? -
57 HHSearch 77.8526% - - C2 -4I5S - ? -
58 HHSearch 65.2934% 6 - C2 -4U7O 9.1 ?
59 HHSearch 64.0834% 11 - C2 -5C93 - ? -
5 PsiBlast_PDB 62.7532% 12 - C2 -5C93 7.0 ?
2 PsiBlast_PDB 62.5132% 6 - C2 -4U7O 9.1 ?
8 PsiBlast_PDB 62.2533% 31 - C2 -4JAV 8.6 ?
54 Fugue 61.8117% -70 - C2 -1JM6 - PDK2_RAT -
63 HHSearch 61.0133% 48 - C2 -4JAV 8.6 ?
3 PsiBlast_PDB 60.6332% -2 - C2 -4ZKI - ? -
10 PsiBlast_PDB 60.5033% 16 - C2 -4JAU 6.5 ?
48 Fugue 59.6623%-117 - C2 -1ID0 - -
4 PsiBlast_PDB 59.2234% - - C2 -4I5S - ? -
7 PsiBlast_PDB 58.9333% 35 - C2 -3DGE 6.9 ?
24 PsiBlast_CBE 58.8333% 49 - C2 -4JAV - ? -
25 PsiBlast_CBE 57.8133% 40 - C2 -3DGE 7.8 ?
6 PsiBlast_PDB 57.6933% 27 - C2 -2C2A 7.6 ?
9 PsiBlast_PDB 56.8133% 38 - C2 -4JAS 8.6 ?
62 HHSearch 56.4933% 45 - C2 -2C2A 7.6 ?
23 PsiBlast_CBE 56.1932% 34 - C2 -5C93 7.2 ?
22 PsiBlast_CBE 52.4232% 39 - C2 -4U7O 9.2 ?