Binding Site Information :
Doc...
Information extracted from the bests complexes created by comparative docking.



Prediction Binding Site :


Binding Site Prediction
[Download fasta file] - [Download text file]

Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: ANP_J_5(3C41) / Model_8(3C41/J) = [7.3] Download893.713.06MGTFSVRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQVLLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKIEDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFTNPKDQRTEDYISGRFG
Complex: ATP_A_5(1B0U) / Model_20(1B0U/A) = [6.0] Download1164.9217.22MGTFSVRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQVLLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKIEDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFTNPKDQRTEDYISGRFG
Complex: AGS_B_6(3C4J) / Model_24(3C4J/B) = [5.3] Download871.6512.41MGTFSVRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQVLLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKIEDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFTNPKDQRTEDYISGRFG
Complex: ADP_A_3(3TIF) / Model_112(3TIF/A) = [4.2] Download691.875.73MGTFSVRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQVLLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKIEDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFTNPKDQRTEDYISGRFG
Complex: ACP_A_4(4AYT) / Model_68(4AYT/A) = [3.9] Download1008.849.08MGTFSVRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQVLLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKIEDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFTNPKDQRTEDYISGRFG
Consensus
[pKd Mean = 5.34]
-926
(s=156)
9
(s=5)
MGTFSVRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQVLLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKIEDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFTNPKDQRTEDYISGRFG



Statistical distribution of contacts between receptors and ligands in all complexes :
(only contacts < 8A are taken into consideration)


Res_NameRes_NumRes_AtNb_ContactsNb_ComplexesNb[At_Ligand]
LEU11CD226512[C], 7[N], 2[P], 5[O],
LEU11CG1352[O], 7[C], 4[N],
LEU11CD1452[C], 2[N],
TYR13CG57515[N], 30[C], 12[O],
TYR13CD166518[O], 3[P], 15[N], 30[C],
TYR13CE169515[N], 30[C], 21[O], 3[P],
TYR13CZ67515[N], 30[C], 19[O], 3[P],
TYR13CD255529[C], 15[N], 11[O],
TYR13CE262514[O], 3[P], 15[N], 30[C],
PHE16CG38510[O], 22[C], 6[N],
PHE16CZ4055[N], 21[C], 13[O], 1[P],
PHE16CD13155[N], 17[C], 9[O],
PHE16CE130516[C], 4[N], 10[O],
PHE16CD250510[N], 26[C], 13[O], 1[P],
PHE16CE25452[P], 18[O], 26[C], 8[N],
LEU19CD22254[C], 14[O], 4[P],
LEU19CG1854[P], 10[O], 4[C],
LEU19CD1454[O],
LEU34CD2252[O],
PRO37CG656[O],
PRO37CD757[O],
SER38OG62512[P], 39[O], 9[C], 1[S], 1[N],
CYS40SG57538[O], 14[P], 1[N], 4[C],
LYS42CE56514[P], 39[O], 1[S], 1[C], 1[N],
LYS42CD4851[S], 1[C], 1[N], 14[P], 31[O],
LYS42CG5951[N], 1[S], 3[C], 40[O], 14[P],
LYS42NZ6051[N], 1[S], 4[C], 41[O], 13[P],
SER43OG71514[P], 44[O], 1[S], 10[C], 2[N],
THR44OG1130549[O], 10[P], 22[N], 49[C],
THR44CG27655[P], 27[O], 31[C], 13[N],
PHE45CD1454[O],
PHE45CE1252[O],
PHE45CG151[O],
LEU46CG252[O],
LEU46CD1252[O],
LYS47CD4855[P], 17[O], 14[C], 12[N],
LYS47CE56513[N], 17[C], 21[O], 5[P],
LYS47CG2453[C], 6[N], 5[P], 10[O],
LYS47NZ7655[P], 25[O], 26[C], 20[N],
ASN53OD1954[C], 5[N],
ASN53ND238517[C], 19[N], 2[O],
ASN53CG1959[N], 10[C],
GLN91NE22651[C], 1[S], 17[O], 7[P],
GLN91CG1451[S], 1[C], 9[O], 3[P],
GLN91CD2451[C], 1[S], 5[P], 17[O],
GLN91OE13051[C], 1[S], 20[O], 8[P],
ASP171OD14951[C], 1[S], 1[N], 13[P], 33[O],
ASP171OD248531[O], 14[P], 1[N], 1[C], 1[S],
ASP171CG36510[P], 23[O], 1[C], 1[S], 1[N],
GLU172OE12255[P], 15[O], 1[S], 1[N],
GLU172CG1751[S], 5[P], 11[O],
GLU172CD27518[O], 7[P], 1[N], 1[S],
GLU172OE23157[P], 22[O], 1[S], 1[N],
SER175OG654[O], 1[P], 1[S],
VAL201CG13451[S], 1[C], 1[N], 9[P], 22[O],
VAL201CG21951[S], 13[O], 5[P],
HIS203CG655[O], 1[S],
HIS203ND11251[S], 8[O], 3[P],
HIS203NE23251[C], 1[S], 22[O], 8[P],
HIS203CD21851[S], 5[P], 12[O],
HIS203CE12551[S], 1[C], 17[O], 6[P],
PHE218CE2651[C], 3[O], 2[P],
PHE218CE1151[O],
PHE218CZ351[C], 2[O],
PHE218CD1551[P], 4[O],
PHE218CD2551[P], 4[O],
PHE218CG555[O],
TYR244CZ151[O],
TYR244CE1252[O],
ARG248CZ351[P], 2[O],
ARG248NE151[O],
Total = 71



Download csv file of statistical distribution of contacts