@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1898: (2018-01-22 )
MGTFSVRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQVLLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEKSLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKIEDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDVFTNPKDQRTEDYISGRFG

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ANP_A_2(4AYW)
ABCBA_HUMAN
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ATP_A_2(3NH9)

[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_D_7(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]




ANP_C_8(3B5Y)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_D_8(3B5Z)
MSBA_SALTY
[Raw transfer]




3 PsiBlast_PDB 82.2936% -41 - C1 -2OLJ 6.1 ?
31 PsiBlast_CBE 81.3336% -44 - C1 -2OLK 6.3 ?
24 PsiBlast_CBE 80.9036% -35 - C1 -3C4J 5.3 ?
29 PsiBlast_CBE 80.5736% -42 - C1 -2OLK 6.1 ?
30 PsiBlast_CBE 80.5136% -41 - C1 -2OLK - ? -
7 PsiBlast_PDB 79.5136% -37 - C1 -3C4J 6.7 ?
8 PsiBlast_PDB 79.1836% -35 - C1 -3C41 7.3 ?
32 PsiBlast_CBE 78.8736% -36 - C1 -2OLJ 5.9 ?
5 PsiBlast_PDB 77.5336% -43 - C1 -2OUK - ? -
4 PsiBlast_PDB 76.5936% -40 - C1 -2OLK - ? -
33 PsiBlast_CBE 76.2636% -40 - C1 -3C41 5.8 ?
6 PsiBlast_PDB 76.0236% -37 - C1 -2Q0H - ? -
2 PsiBlast_PDB 75.6638% -21 - C1 -4U02 - ? -
9 PsiBlast_PDB 75.4834% -47 - C1 -4YMS - ? -
13 PsiBlast_PDB 75.4134% -50 - C1 -4YMW - ? -
10 PsiBlast_PDB 75.3134% -46 - C1 -4YMT - ? -
1 PsiBlast_PDB 75.0138% -21 - C1 -4U00 - ? -
11 PsiBlast_PDB 74.9734% -48 - C1 -4YMU - ? -
34 PsiBlast_CBE 74.5034% -45 - C1 -4YMV 4.7 ?
35 PsiBlast_CBE 73.8034% -46 - C1 -4YMU 5.6 ?
161 Fugue 69.7039% 24 - C1 -1B0U 6.0 HISP_SALTY
20 PsiBlast_PDB 68.1137% -12 - C1 -1B0U 6.0 HISP_SALTY
43 PsiBlast_CBE 67.4933% -27 - C1 -5X40 7.2 CBIO_RHOCB
44 PsiBlast_CBE 67.2233% -21 - C1 -5X40 7.6 CBIO_RHOCB
66 PsiBlast_CBE 64.8132% -52 - C1 -4AYW 3.8 ABCBA_HUMAN
68 PsiBlast_CBE 64.4632% -41 - C1 -4AYT 3.9 ABCBA_HUMAN
67 PsiBlast_CBE 63.5532% -37 - C1 -4AYX 3.7 ABCBA_HUMAN
97 PsiBlast_CBE 39.5531% -31 - C1 -3NH9 5.9
112 PsiBlast_CBE 38.6733% 4 - C1 -3TIF 4.2 Y796_METJA
111 PsiBlast_CBE 38.5633% 4 - C1 -3TIF 4.5 Y796_METJA
103 PsiBlast_CBE 36.7733% 9 - C1 -1L2T 4.8 Y796_METJA
102 PsiBlast_CBE 34.8233% 8 - C1 -1L2T 4.8 Y796_METJA
90 PsiBlast_CBE 32.6131% - - C1 -3B5Z 2.3 MSBA_SALTY
89 PsiBlast_CBE 32.6131% - - C1 -3B5Z 2.9 MSBA_SALTY
88 PsiBlast_CBE 32.6131% - - C1 -3B5Z 2.3 MSBA_SALTY
87 PsiBlast_CBE 32.6031% - - C1 -3B5Z 2.5 MSBA_SALTY
94 PsiBlast_CBE 32.5031% - - C1 -3B5Y 2.1 MSBA_SALTY
93 PsiBlast_CBE 32.5031% - - C1 -3B5Y 1.9 MSBA_SALTY
92 PsiBlast_CBE 32.5031% - - C1 -3B5Y 1.9 MSBA_SALTY
91 PsiBlast_CBE 32.5031% - - C1 -3B5Y 1.9 MSBA_SALTY