@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1902: (2018-01-22 )
MEKQTVAVLGPGSWGTALSQVLNDNGHEVRIWGNLPEQINEINTHHTNKHYFKDVVLDENIIAYTDLAETLKNVDAILFVVPTKVTRLVAQQVAQTLDHKVIIMHASKGLEPDSHKRLSTILEEEIPEHLRSDIVVVSGPSHAEETIVRDLTLITAASKDLQTAQYVQELFSNHYFRLYTNTDVIGVETAGALKNIIAVGAGALHGLGFGDNAKAAIIARGLAEITRLGVALGASPLTYSGLSGVGDLIVTGTSIHSRNWRAGDALGRGESLADIEANMGMVIEGISTTRAAYELAQELGVYMPITQAIYQVIYHGTNIKDAIYDIMNNEFKAENEWS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_A_3(1Z82)
?
[Raw transfer]



G3P_B_6(1Z82)
?
[Raw transfer]



G3P_B_6(1Z82)
?
[Raw transfer]
44 HHSearch 72.4530% - - C1 -4FGW - GPD1_YEAST -
15 PsiBlast_PDB 71.7929% - - C1 -4FGW - GPD1_YEAST -
46 HHSearch 70.8135% -72 - C1 -3K96 - GPDA_COXBU -
22 PsiBlast_CBE 70.4035% -64 - C1 -3K96 - GPDA_COXBU -
45 HHSearch 70.3735% -74 - C1 -3K96 - GPDA_COXBU -
42 HHSearch 70.3139%-109 - C1 -1Z82 4.7 ?
9 PsiBlast_PDB 70.1035% -60 - C1 -3K96 - GPDA_COXBU -
39 HHSearch 68.0435% -45 * C1 *1N1E - GPDA_LEIME -
1 PsiBlast_PDB 67.6737%-109 - C1 -1Z82 10.8 ?
40 HHSearch 66.9335% -46 - C1 -1EVY - GPDA_LEIME -
7 PsiBlast_PDB 64.3734% -42 - C1 -1N1E - GPDA_LEIME -
6 PsiBlast_PDB 64.3234% -45 - C1 -1M67 - GPDA_LEIME -
21 PsiBlast_CBE 64.2734% -40 - C1 -1N1E - GPDA_LEIME -
5 PsiBlast_PDB 64.1334% -43 - C1 -1M66 - GPDA_LEIME -
2 PsiBlast_PDB 63.9234% -42 - C1 -1EVY - GPDA_LEIME -
3 PsiBlast_PDB 63.8134% -43 - C1 -1EVZ - GPDA_LEIME -
11 PsiBlast_PDB 63.5730% -19 - C1 -1WPQ - GPDA_HUMAN -
8 PsiBlast_PDB 63.4634% -40 - C1 -1N1G - GPDA_LEIME -
10 PsiBlast_PDB 63.4530% -22 - C1 -1X0X - GPDA_HUMAN -
29 Fugue 63.3034% -2 - C1 -1EVY - GPDA_LEIME -