@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1910: (2018-01-22 )
MHIFDELKERGLIFQTTDEEALRKALEEGQVSYYTGYDPTADSLHLGHLVAILTSRRLQLAGHKPYALVGGATGLIGDPSFKDAERSLQTKDTVDGWVKSIQGQLSRFLDFENGENKAVMVNNYDWFGSISFIDFLRDIGKYFTVNYMMSKESVKKRIETGISYTEFAYQIMQGYDFFVLNQDHNVTLQIGGSDQWGNMTAGTELLRRKADKTGHVITVPLITDATGKKFGKSEGNAVWLNPEKTSPYEMYQFWMNVMDADAVRFLKIFTFLSLDEIEDIRKQFEAAPHERLAQKVLAREVVTLVHGEEAYKEALNITEQLFAGNIKNLSVKELKQGLRGVPNYQVQADENNNIVELLVSSGIVNSKRQAREDVQNGAIYVNGDRIQELDYVLSDADKLENELTVIRRGKKKYFVLTY

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YSA_H_8(1VBM)
SYY_ECOLI
[Raw transfer]



YSA_B_4(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_B_4(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_A_3(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_A_3(2PID)
SYYM_HUMAN
[Raw transfer]



YSA_D_4(1VBN)
SYY_ECOLI
[Raw transfer]



YSA_C_3(1VBN)
SYY_ECOLI
[Raw transfer]



YSA_G_7(1VBM)
SYY_ECOLI
[Raw transfer]



TYA_A_3(3ZXI)
SYYM_HUMAN
[Raw transfer]



YSA_G_7(1VBM)
SYY_ECOLI
[Raw transfer]



TYA_C_3(3TS1)
SYY_GEOSE
[Raw transfer]



TYA_B_4(3ZXI)
SYYM_HUMAN
[Raw transfer]



AZY_A_2(2YXN)
SYY_ECOLI
[Raw transfer]



AZY_A_2(2YXN)
SYY_ECOLI
[Raw transfer]



TYR_S_3(1TYD)
SYY_GEOSE
[Raw transfer]



TYR_S_3(1TYA)
SYY_GEOSE
[Raw transfer]



TYR_S_3(1TYD)
SYY_GEOSE
[Raw transfer]



TYR_E_5(1X8X)
SYY_ECOLI
[Raw transfer]



TYR_S_3(1TYB)
SYY_GEOSE
[Raw transfer]



TYR_C_3(4TS1)
SYY_GEOSE
[Raw transfer]



TYR_D_4(4TS1)
SYY_GEOSE
[Raw transfer]



TYR_C_3(1WQ4)
SYY_ECOLI
[Raw transfer]



TYR_C_3(1Y42)
SYYM_NEUCR
[Raw transfer]



IYR_C_3(1WQ3)
SYY_ECOLI
[Raw transfer]



ATP_A_5(1H3E)
SYY_THET2
[Raw transfer]



TYR_X_2(4OJM)
SYYM_NEUCR
[Raw transfer]



TYR_X_2(4OJM)
SYYM_NEUCR
[Raw transfer]
171 HHSearch 91.3246% -34 - C3 -2JAN - SYY_MYCTU -
170 HHSearch 89.9346% -34 - C3 -2JAN - SYY_MYCTU -
14 PsiBlast_PDB 88.1445% -16 - C3 -2JAN - SYY_MYCTU -
168 HHSearch 84.4557% -90 - C3 -2TS1 - SYY_GEOSE -
9 PsiBlast_PDB 82.7458% -46 - C3 -1TYB 2.6 SYY_GEOSE
6 PsiBlast_PDB 82.3953% -53 - C3 -1JIL - SYY_STAAE -
15 PsiBlast_PDB 82.3356% -41 - C3 -1WQ3 3.6 SYY_ECOLI
169 HHSearch 82.1653% -53 - C3 -1JIL - SYY_STAAE -
179 HHSearch 81.9857% -68 - C3 -1TYD 3.4 SYY_GEOSE
8 PsiBlast_PDB 81.9758% -51 - C3 -1TYD 3.4 SYY_GEOSE
10 PsiBlast_PDB 81.8858% -49 - C3 -1TYC - SYY_GEOSE -
22 PsiBlast_CBE 81.7057% -39 - C3 -1VBM 8.0 SYY_ECOLI
7 PsiBlast_PDB 81.7058% -52 - C3 -1TYA 2.8 SYY_GEOSE
12 PsiBlast_PDB 81.6657% -43 - C3 -1X8X 3.2 SYY_ECOLI
23 PsiBlast_CBE 81.5156% -43 - C3 -1VBN 6.6 SYY_ECOLI
1 PsiBlast_PDB 81.3457% -49 - C3 -2TS1 - SYY_GEOSE -
2 PsiBlast_PDB 81.2457% -50 - C3 -3TS1 6.5 SYY_GEOSE
16 PsiBlast_PDB 80.8956% -46 - C3 -2YXN 2.6 SYY_ECOLI
11 PsiBlast_PDB 80.4758% -49 - C3 -4TS1 2.8 SYY_GEOSE
5 PsiBlast_PDB 80.2353% -48 - C3 -1JIK - SYY_STAAE -
17 PsiBlast_PDB 79.8856% -45 - C3 -1WQ4 2.9 SYY_ECOLI
21 PsiBlast_CBE 79.4958% -49 - C3 -4TS1 2.9 SYY_GEOSE
13 PsiBlast_PDB 78.7057% -36 - C3 -1VBM 7.4 SYY_ECOLI
18 PsiBlast_PDB 78.4756% -42 - C3 -1VBN 7.6 SYY_ECOLI
181 HHSearch 76.5855% -0 - C3 -2YXN 2.6 SYY_ECOLI
180 HHSearch 75.9656% 3 * C3 *1VBM 7.4 SYY_ECOLI
177 HHSearch 71.2640% -9 - C3 -2PID 7.5 SYYM_HUMAN
174 HHSearch 69.4335% 6 - C3 -4OJM 3.4 SYYM_NEUCR
178 HHSearch 68.0840% 7 - C3 -2PID 7.9 SYYM_HUMAN
19 PsiBlast_PDB 66.7640% 14 - C3 -2PID 7.9 SYYM_HUMAN
25 PsiBlast_CBE 66.6640% 15 - C3 -2PID 7.5 SYYM_HUMAN
26 PsiBlast_CBE 66.1933% 7 - C3 -4OJM 3.4 SYYM_NEUCR
27 PsiBlast_CBE 65.5333% 5 - C3 -1Y42 3.2 SYYM_NEUCR
20 PsiBlast_PDB 64.6440% 11 - C3 -3ZXI 7.6 SYYM_HUMAN
24 PsiBlast_CBE 64.5640% 13 - C3 -3ZXI 7.8 SYYM_HUMAN