@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1918: (2018-01-22 )
MSSKFMKSTAVLGTVTLASLLLVACGSKTADKPADSGSSEVKELTVYVDEGYKSYIEEVAKAYEKEAGVKVTLKTGDALGGLDKLSLDNQSGNVPDVMMAPYDRVGSLGSDGQLSEVKLSDGAKTDDTTKSLVTAANGKVYGAPAVIESLVMYYNKDLVKDAPKTFADLENLAKDSKYAFAGEDGKTTAFLADWTNFYYTYGLLAGNGAYVFGQNGKDAKDIGLANDGSIAGINYAKSWYEKWPKGMQDTEGAGNLIQTQFQEGKTAAIIDGPWKAQAFKDAKVNYGVATIPTLPNGKEYAAFGGGKAWVIPQAVKNLEASQKFVDFLVATEQQKVLYDKTNEIPANTEARSYAEGKNDELTTAVIKQFKNTQPLPNISQMSAVWDPAKNMLFDAVSGQKDAKTAANDAVTLIKETIKQKFGE

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SUGAR_A_2(2XD3)
MALX_STRPN
[Raw transfer]
-
SUGAR_A_2(2XD3)
MALX_STRPN
[Raw transfer]
-
SUGAR_A_2(2ZYO)
?
[Raw transfer]
-
MAL_B_18(4HW8)
?
[Raw transfer]



MAL_A_2(5TU0)
?
[Raw transfer]



MAL_A_2(5TU0)
?
[Raw transfer]



1PE_A_10(3CSB)
MALE_ECOLI
[Raw transfer]
2 PsiBlast_PDB 93.9398% -68 - C1 -2XD3 8.1 MALX_STRPN
1 PsiBlast_PDB 90.6398% -72 - C1 -2XD2 - MALX_STRPN -
124 HHSearch 80.8696% -3 - C1 -2XD3 8.1 MALX_STRPN
125 HHSearch 76.7396% 1 - C1 -2XD2 - MALX_STRPN -
3 PsiBlast_PDB 70.2553% -24 - C1 -5TU0 2.7 ?
122 HHSearch 64.7453% 9 - C1 -5TU0 2.7 ?
15 PsiBlast_PDB 59.2827% -26 - C1 -2FNC - ? -
142 Fugue 57.4526% 30 - C1 -3PY7 - MALE_ECOLI (first) -
126 HHSearch 56.4528% 3 - C1 -2FNC - ? -
8 PsiBlast_PDB 56.0628% -30 - C1 -2GHA - ? -
138 Fugue 54.2726% 34 - C1 -2VGQ - MALE_ECOLI (first) -
6 PsiBlast_PDB 53.7431% 52 - C1 -2ZYN - ? -
145 Fugue 53.5127% 29 - C1 -4EXK - MALE_ECOLI -
25 PsiBlast_CBE 53.3231% 60 - C1 -2OK2 - MALE_ECOLI -
128 HHSearch 52.2628% 2 - C1 -2GHA - ? -
18 PsiBlast_PDB 52.1931% 61 - C1 -2OK2 - MALE_ECOLI (first) -
19 PsiBlast_PDB 52.0730% 53 - C1 -1JVY - MALE_ECOLI -
140 Fugue 51.9726% 34 - C1 -3D4G - ZP3_MOUSE -
63 PsiBlast_CBE 51.7531% 54 - C1 -1JW5 - MALE_ECOLI -
21 PsiBlast_CBE 51.3531% 56 - C1 -2ZYK - ? -
36 PsiBlast_CBE 45.3831% 56 - C1 -3CSB 3.0 MALE_ECOLI