@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr1949: (2018-01-23 )
MVRFTGLSPKQTQAIEVLKGHISLPDVEVAVTQSDQASISIQGEEGHYQLTYRKPHQLYRALSLLVTVLAEADKVEIEEQAAYEDLAYMVDCSRNAVLNVASAKQMIEVLALMGYSTFELYMEDTYQIEGQPYFGYFRGAYSAEELQEIEAYAQQFDMTFVPCIQTLAHLSAFVKWGVKEVQELRDVEDILLIGEEKVYDLIDGMFATLSKLKTRKVNIGMDEAHLVGLGRYLILNGVVDRSLLMCQHLERVLDIADKYGFHCQMWSDMFFKLMSADGQYDRDVKIPEETRVYLDRLKDRVTLVYWDYYQDSEEKYNRNFRNHHKISHDLAFAGGAWKWIGFTPHNHFSRLVAIEANKACRANQIKEVIVTGWGDNGGETAQFSILPSLQIWAELSYRNDLDGLSAHFKTNTGLTVEDFMQIDLANLLPDLPGNLSGINPNRYVFYQDILCPILDQHMTPEQDKPHFAQAAETLANIKEKAGNYAYLFETQAQLNAILSSKVDVGRRIRQAYQADDKESLQQIARQELPELRSQIEDFHALFSHQWLKENKVFGLDTVDIRMGGLLQRIKRAESRIEVYLAGQLDRIDELEVEILPFTDFYADKDFAATTANQWHTIATASTIYTT

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAG_A_3(5AC5)
?
[Raw transfer]



NGT_A_4(5A6A)
?
[Raw transfer]



NSG_B_4(5A6K)
?
[Raw transfer]



NGT_B_5(5A6A)
?
[Raw transfer]



NSG_A_3(5A6K)
?
[Raw transfer]



NAG_B_6(5AC5)
?
[Raw transfer]



ACY_A_3(2EPO)
?
[Raw transfer]



ACY_A_3(2EPO)
?
[Raw transfer]



ACY_B_4(2EPO)
?
[Raw transfer]
4 PsiBlast_PDB 98.8999%-102 - C5 -5A6K 5.1 ?
5 PsiBlast_PDB 98.7199%-102 - C5 -5AC5 4.7 ?
22 PsiBlast_CBE 98.6899%-103 - C5 -5A6K 5.0 ?
6 PsiBlast_PDB 98.5799%-103 - C5 -5AC4 - ? -
25 PsiBlast_CBE 98.2599%-101 - C5 -5AC4 - ? -
26 PsiBlast_CBE 98.1599%-103 - C5 -5A6B - ? -
3 PsiBlast_PDB 97.6999%-100 - C5 -5A6J - ? -
2 PsiBlast_PDB 97.5399%-100 - C5 -5A6A 5.0 ?
1 PsiBlast_PDB 97.4199%-104 - C5 -5A6B - ? -
20 PsiBlast_CBE 97.3999%-108 - C5 -5A6B - ? -
21 PsiBlast_CBE 97.2899%-103 - C5 -5AC5 4.8 ?
23 PsiBlast_CBE 96.7399%-101 - C5 -5A6J - ? -
24 PsiBlast_CBE 94.6999%-105 - C5 -5A6A 4.3 ?
10 PsiBlast_PDB 86.0772% -24 - C5 -2EPO 3.5 ?
39 HHSearch 85.6572% -31 - C5 -2EPL - ? -
40 HHSearch 85.6372% -30 - C5 -2EPO 3.5 ?
9 PsiBlast_PDB 85.5372% -26 - C5 -2EPN - ? -
7 PsiBlast_PDB 85.5072% -25 - C5 -2EPL - ? -
29 Fugue 85.3272% -25 - C5 -2EPL - ? -
28 PsiBlast_CBE 85.3072% -25 - C5 -2EPN - ? -
27 PsiBlast_CBE 82.5872% -27 - C5 -2EPO 3.7 ?