@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr2025: (2018-01-25 )
MGIALENVNFIYQEGTPLASAALSDVSLTIEDGSYTALIGHTGSGKSTILQLLNGLLVPSQGSVRVFDTLITSTSKNKDIRQIRKQVGLVFQFAENQIFEETVLKDVAFGPQNFGVSEEDAVKTAREKLALVGIDESLFDRSPFELSGGQMRRVAIAGILAMEPSILVLDEPTAGLDPLGRKELMTLFKKLHQSGMTIVLVTHLMDDVAEYANQVYVMEKGRLVKGGKPSDVFQDVVFMEEVQLGVPKITAFCKRLADRGVSFKRLPIKIEEFKESLNG

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




ADP_B_10(1G9X)
LIVG_METJA
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




ADP_C_12(1G9X)
LIVG_METJA
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_A_8(1G9X)
LIVG_METJA
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




BME_A_2(3NH6)

[Raw transfer]




BME_A_3(3NH9)

[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




BME_A_3(3NHB)

[Raw transfer]




22 PsiBlast_CBE 82.8246%-116 - C1 -5D3M - ECFA2_LACDA -
2 PsiBlast_PDB 82.6356% - - C1 -4HZU - ECFA2_LACBA -
1 PsiBlast_PDB 82.5756% - - C1 -4HUQ - ECFA2_LACBA -
3 PsiBlast_PDB 82.5556% - - C1 -4RFS - ECFA2_LACBA -
5 PsiBlast_PDB 82.5046%-119 - C1 -5D3M - ECFA2_LACDA -
133 HHSearch 82.2756% - - C1 -4HZU - ECFA2_LACBA -
132 HHSearch 82.2256% - - C1 -4HUQ - ECFA2_LACBA -
6 PsiBlast_PDB 80.9646%-112 - C1 -5JSZ - ECFA2_LACDA -
4 PsiBlast_PDB 79.5850% -69 - C1 -4MKI 4.0 ECFA2_CALS4
21 PsiBlast_CBE 78.5250% -73 - C1 -4MKI 3.0 ECFA2_CALS4
143 HHSearch 77.7051% -92 - C1 -4MKI - ECFA2_CALS4 -
25 PsiBlast_CBE 76.5439%-131 - C1 -5X40 - CBIO_RHOCB -
10 PsiBlast_PDB 75.9039%-132 - C1 -5X40 - CBIO_RHOCB -
145 HHSearch 75.2941%-132 - C1 -5X40 - CBIO_RHOCB -
8 PsiBlast_PDB 71.4439%-131 - C1 -5X3X - CBIO_RHOCB -
142 HHSearch 70.9643%-129 - C1 -5X3X - CBIO_RHOCB -
7 PsiBlast_PDB 69.0239%-110 - C1 -3GFO - ECFA3_CLOP1 -
9 PsiBlast_PDB 66.7939%-130 - C1 -5X41 - ? -
13 PsiBlast_PDB 64.6741% -89 - C1 -4HLU 5.4 ECFA2_THEMA
26 PsiBlast_CBE 64.3941% -89 - C1 -4HLU 6.2 ECFA2_THEMA
52 PsiBlast_CBE 56.3138% -66 - C1 -2OLK 4.0 ?
46 PsiBlast_CBE 54.5838% -69 - C1 -2Q0H 3.3 ?
57 PsiBlast_CBE 54.3738% -71 - C1 -3C41 3.4 ?
54 PsiBlast_CBE 53.5238% -69 - C1 -2OLK 3.8 ?
53 PsiBlast_CBE 52.8338% -75 - C1 -2OLK 3.9 ?
44 PsiBlast_CBE 52.4738% -67 - C1 -3C4J 4.7 ?
43 PsiBlast_CBE 52.3038% -63 - C1 -3C4J 4.3 ?
55 PsiBlast_CBE 51.9638% -64 - C1 -2OLJ 3.6 ?
45 PsiBlast_CBE 51.9138% -72 - C1 -2Q0H 3.8 ?
58 PsiBlast_CBE 51.5338% -63 - C1 -3C41 4.7 ?
131 PsiBlast_CBE 51.4731% -57 - C1 -3NH6 2.7
51 PsiBlast_CBE 51.4638% -73 - C1 -2OLK 4.0 ?
56 PsiBlast_CBE 51.3538% -71 - C1 -2OLJ 3.9 ?
73 PsiBlast_CBE 49.6834% -47 - C1 -3TIF 3.1 Y796_METJA
130 PsiBlast_CBE 48.4431% -56 - C1 -3NH9 2.7
67 PsiBlast_CBE 48.0438% -7 - C1 -1B0U 4.5 HISP_SALTY
128 PsiBlast_CBE 48.0131% -58 - C1 -3NHB 2.5
14 PsiBlast_PDB 47.0140% -9 - C1 -4U00 4.2 ?
104 PsiBlast_CBE 46.2631% -30 - C1 -1G9X 4.4 LIVG_METJA
105 PsiBlast_CBE 45.5031% -25 - C1 -1G9X 3.2 LIVG_METJA
103 PsiBlast_CBE 44.7731% -25 - C1 -1G9X 2.8 LIVG_METJA
111 PsiBlast_CBE 40.0732% -21 - C1 -3FVQ 4.4 FBPC_NEIG1
110 PsiBlast_CBE 39.7132% -17 - C1 -3FVQ 5.0 FBPC_NEIG1