@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : spr2045: (2018-01-25 )
MEANMKHLKTFYKKWFQLLVVIVISFFSGALGSFSITQLTQKSSVNNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSANRQNSVFGNDDTDTDSQRISSEGSGVIYKKNDKEAYIVTNNHVINGASKVDIRLSDGTKVPGEIVGADTFSDIAVVKISSEKVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKSSGDLES

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BOG_B_9(3TJO)
HTRA1_HUMAN
[Raw transfer]



GOL_B_11(3TJO)
HTRA1_HUMAN
[Raw transfer]



DFP_A_2(3MH6)
DEGP_ECOLI
[Raw transfer]
52 Fugue 82.0935% - - C- -3PV2 - ? -
79 HHSearch 75.1636% -29 - C1 -5T69 - HHOA_SYNY3 -
61 HHSearch 72.8130% -13 - C1 -1TE0 - DEGS_ECOLI -
77 HHSearch 72.1133% - - C1 -4IC6 - DEGP8_ARATH -
51 Fugue 71.6733% -67 - C1 -3LGI - DEGS_ECOLI -
60 HHSearch 71.3936% -23 - C1 -5B6L - HHOA_SYNY3 -
56 Fugue 69.8625% -13 - C1 -4FLN - DEGP2_ARATH -
2 PsiBlast_PDB 68.9035% -3 - C1 -3STJ - DEGQ_ECOLI -
9 PsiBlast_PDB 68.1736% -38 - C1 -3CS0 - DEGP_ECOLI -
3 PsiBlast_PDB 68.0635% - - C1 -4A8C - DEGQ_ECOLI -
10 PsiBlast_PDB 68.0336% -39 - C1 -3MH7 - DEGP_ECOLI -
66 HHSearch 67.9834% -7 - C1 -3QO6 - DEGP1_ARATH -
82 HHSearch 67.6035% - - C1 -4A8C - DEGQ_ECOLI -
4 PsiBlast_PDB 67.4935% - - C1 -4A9G - DEGQ_ECOLI -
15 PsiBlast_PDB 67.3235% -9 - C1 -3PV3 - ? -
6 PsiBlast_PDB 67.1236% -49 - C1 -2ZLE - DEGP_ECOLI -
65 HHSearch 65.6435% 28 - C1 -2ZLE - DEGP_ECOLI -
63 HHSearch 65.6242% 22 - C1 -2Z9I - ? -
70 HHSearch 65.5629% -19 - C1 -5FHT - HTRA2_HUMAN -
12 PsiBlast_PDB 65.1736% -26 - C1 -3OU0 - DEGP_ECOLI -
5 PsiBlast_PDB 60.9436% -36 - C1 -3MH6 3.5 DEGP_ECOLI
48 PsiBlast_CBE 49.7038% -66 - C1 -3TJO 4.0 HTRA1_HUMAN