@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKI7: (2017-10-26 )
MKLPQADFQHRRNRLAEKMGPNSIAIIATREEMYRNRDADYKFRADSSFFYLTGFAEPEAVAVIETFDDVTDYSYSLFCRERNREMEIWNGYRAGIDGAIEENEADEAYAIDLLDEEIIEKLLNKERLYYRIGHNAAFDARVSQWIKKANAEHRHEAAPAQLVQLDRIVDEMRLIKSPQEIELMQIASTISAKAHTRAMQTVRPGMMEYALEAELNYIFGQNGCVPSYNSIVGGGANACILHYVENNQALKDGDLVLIDAACEYEFYASDITRTFPVNGKFSPEQKALYEVVLASQYAAIDAVRIGNSYREPHEVAVKILTEGLVDLGLLKGDVSELIETEAYRQFYMHGTGHWLGMDVHDVGSYKKDDDWRQYEEGMVVTVEPGLYIAPDDETVDKKWRGIGIRIEDDVVATSKGPRVLTADVVKDIADIEHLMAQAKA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P6G_B_10(4PV4)
?
[Raw transfer]



PG4_A_3(1WLR)
AMPP_ECOLI
[Raw transfer]



MRD_A_8(2BHB)
AMPP_ECOLI
[Raw transfer]



P6G_A_6(3CTZ)
XPP1_HUMAN
[Raw transfer]



MRD_A_6(2BWW)
AMPP_ECOLI
[Raw transfer]



LEU_B_15(5M4L)
?
[Raw transfer]



IPA_A_7(1WL6)
AMPP_ECOLI
[Raw transfer]



MPD_A_5(2BWT)
AMPP_ECOLI
[Raw transfer]



GOA_B_7(4ZWU)
PEPQ_ALTSX
[Raw transfer]



GOA_A_8(4ZWO)
PEPQ_ALTSX
[Raw transfer]



XPE_A_6(1WL6)
AMPP_ECOLI
[Raw transfer]



LEU_A_3(2BH3)
AMPP_ECOLI
[Raw transfer]



EDO_B_12(4PV4)
?
[Raw transfer]



LEU_A_3(2BN7)
AMPP_ECOLI
[Raw transfer]
12 PsiBlast_PDB 92.7648% -19 - C1 -2BH3 2.8 AMPP_ECOLI
8 PsiBlast_PDB 92.2948% -19 - C1 -2BHA - AMPP_ECOLI -
18 PsiBlast_PDB 92.1548% -22 - C1 -2BWU - AMPP_ECOLI -
6 PsiBlast_PDB 91.9948% -16 - C1 -1WL6 3.2 AMPP_ECOLI
28 PsiBlast_CBE 91.9048% -19 - C1 -2BWW 2.9 AMPP_ECOLI
15 PsiBlast_PDB 91.8648% -20 - C1 -2V3Z - AMPP_ECOLI -
5 PsiBlast_PDB 91.7148% -18 - C1 -1N51 - AMPP_ECOLI -
9 PsiBlast_PDB 91.6748% -20 - C1 -2BHB 3.2 AMPP_ECOLI
20 PsiBlast_PDB 91.4048% -19 - C1 -2V3X - AMPP_ECOLI -
10 PsiBlast_PDB 91.3748% -20 - C1 -2BHC - AMPP_ECOLI -
11 PsiBlast_PDB 91.3248% -20 - C1 -2BHD - AMPP_ECOLI -
17 PsiBlast_PDB 91.2348% -21 - C1 -2BWT 3.1 AMPP_ECOLI
3 PsiBlast_PDB 91.2148% -18 - C1 -1W2M - AMPP_ECOLI -
1 PsiBlast_PDB 91.1550% -24 - C1 -4PV4 - ? -
2 PsiBlast_PDB 90.8748% -18 - C1 -1WL9 - AMPP_ECOLI -
13 PsiBlast_PDB 90.6448% -19 - C1 -2BN7 2.8 AMPP_ECOLI
7 PsiBlast_PDB 90.5748% -18 - C1 -1WLR 3.0 AMPP_ECOLI
16 PsiBlast_PDB 90.4448% -23 - C1 -2BWY - AMPP_ECOLI -
19 PsiBlast_PDB 90.2348% -18 - C1 -2BWS - AMPP_ECOLI -
14 PsiBlast_PDB 90.2148% -18 - C1 -1JAW - AMPP_ECOLI -
21 PsiBlast_CBE 89.2650% -27 - C1 -4PV4 2.9 ?
43 HHSearch 76.4133% -1 - C1 -5M4L 2.7 ?