@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKJ4: (2017-10-26 )
MPIITLPNGDQKSFDHPVSVMEVAQSIGPGLAKNTVAGRVNDRLVDACDLITEDSTLQIITPKDEEGLEIIRHSCAHLVGHAVKQLFPEAKMVIGPVIEEGFYYDIWMPCPFTLDDMAAIEERMKKLIDQDYDVIKKMTPRDEVIKVFTDRGEEYKLRLVEDMPEEKAMGLYYHQEYVDMCRGPHVPNTKFLKSFKLTKISGAYWRGDAKNEQLQRIYGTAWADKKQLAAYIKRIEEAENRDHRKIGKALDLFHMQEEAPGMVFWHANGWTIYQVLEQYMRKVQQDNGYQEIKTPQIVDFTLWEKSGHAANYAENMFTTHSESRNYAVKPMNCPCHVQVFNQGLKSYRDLPIRLAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTKEQIGKEVADFIKLTLDVYKDFGFEEVQMKLSTRPEKRVGDDALWDLAEKSLADALDAAGLEWELQPGEGAFYGPKIEFSLKDCLGRVWQCGTIQCDFNLPVRLDASYVTEENERDQPVMLHRAILGSFERFIGILIEHYAGFMPPWLSPVQACVMNITDSQAEASEQVVAKLKENGLRAISDLRNEKIGFKIRERTLERIPYLLVLGDREVEEGTVNVRTRSGKNLGTMSVDAFIDLVKSAVAERGRYIVE

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TSB_A_6(4YYE)
SYTM_YEAST
[Raw transfer]



409_A_4(4HWO)
SYT_ECOLI
[Raw transfer]



409_B_6(4HWO)
SYT_ECOLI
[Raw transfer]



TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]



TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]



SSA_B_6(1FYF)
SYT_ECOLI
[Raw transfer]



SSA_A_5(1FYF)
SYT_ECOLI
[Raw transfer]



1B3_A_4(4HWS)
SYT_ECOLI
[Raw transfer]



1B2_A_4(4HWR)
SYT_ECOLI
[Raw transfer]



1B2_B_6(4HWR)
SYT_ECOLI
[Raw transfer]



1B3_B_6(4HWS)
SYT_ECOLI
[Raw transfer]



X16_A_4(4HWP)
SYT_ECOLI
[Raw transfer]



X16_B_6(4HWP)
SYT_ECOLI
[Raw transfer]



1B2_B_6(4HWT)
SYTC_HUMAN
[Raw transfer]



1B2_A_4(4HWT)
SYTC_HUMAN
[Raw transfer]



1B2_A_4(4HWT)
SYTC_HUMAN
[Raw transfer]



THR_B_5(1EVK)
SYT_ECOLI
[Raw transfer]



2CR_B_8(4P3P)
SYT_ECOLI
[Raw transfer]



2CR_A_4(4P3O)
SYT_ECOLI
[Raw transfer]



2CR_B_9(4P3O)
SYT_ECOLI
[Raw transfer]



2CR_A_4(4P3P)
SYT_ECOLI
[Raw transfer]
1 PsiBlast_PDB 77.9263% -40 - C2 -1QF6 - SYT_ECOLI -
9 PsiBlast_PDB 67.4565%-104 - C1 -1EVL - SYT_ECOLI -
10 PsiBlast_PDB 67.4065%-104 - C1 -1FYF 8.5 SYT_ECOLI
38 PsiBlast_CBE 67.0065%-103 - C1 -1EVK 3.2 SYT_ECOLI
7 PsiBlast_PDB 66.9165%-105 - C1 -4P3P 9.3 SYT_ECOLI
12 PsiBlast_PDB 66.7942% -28 - C1 -1NYQ - SYT_STAAW -
2 PsiBlast_PDB 66.7465%-103 - C1 -4HWO 8.9 SYT_ECOLI
34 PsiBlast_CBE 66.7065%-104 - C1 -1FYF 8.6 SYT_ECOLI
8 PsiBlast_PDB 66.5265%-101 - C1 -1EVK - SYT_ECOLI -
25 PsiBlast_CBE 66.5165%-105 - C1 -4P3P 9.0 SYT_ECOLI
37 PsiBlast_CBE 66.4965% -99 - C1 -1EVL - SYT_ECOLI -
13 PsiBlast_PDB 66.3842% -23 - C1 -1NYR - SYT_STAAW -
26 PsiBlast_CBE 66.2565%-101 - C1 -4P3O 8.9 SYT_ECOLI
36 PsiBlast_CBE 66.1365%-101 - C1 -1EVL - SYT_ECOLI -
5 PsiBlast_PDB 65.7665%-104 - C1 -4HWS 9.6 SYT_ECOLI
24 PsiBlast_CBE 65.7065%-103 - C1 -4HWO 8.7 SYT_ECOLI
6 PsiBlast_PDB 65.6465%-104 - C1 -4P3O 8.9 SYT_ECOLI
35 PsiBlast_CBE 65.5465%-101 - C1 -1EVL - SYT_ECOLI -
22 PsiBlast_CBE 65.4165%-103 - C1 -4HWR 7.4 SYT_ECOLI
23 PsiBlast_CBE 65.4065%-101 - C1 -4HWP 8.4 SYT_ECOLI
3 PsiBlast_PDB 65.3765%-102 - C1 -4HWP 8.2 SYT_ECOLI
21 PsiBlast_CBE 65.1965%-102 - C1 -4HWS 9.7 SYT_ECOLI
4 PsiBlast_PDB 65.1165%-102 - C1 -4HWR 6.8 SYT_ECOLI
14 PsiBlast_PDB 56.8644% -95 - C1 -4HWT 5.1 SYTC_HUMAN
78 HHSearch 55.3944% -75 - C1 -4HWT 5.1 SYTC_HUMAN
41 PsiBlast_CBE 55.3244% -72 - C1 -4HWT 5.1 SYTC_HUMAN
73 HHSearch 40.6337% 14 * C1 *3UH0 8.5 SYTM_YEAST
51 PsiBlast_CBE 40.3638% -6 - C1 -3UH0 8.5 SYTM_YEAST
48 PsiBlast_CBE 38.2038% 5 - C1 -4YYE 8.9 SYTM_YEAST