@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKK2: (2017-10-26 )
MKRILIVTGQSGSGKSSALQVLEDLGYYCIDNLPLALLPEIVAKLDHENNLEQLALGVDVRSTRADMQEFDHVFEQLQKHGTVDVIYLTTQDQDLIARFSASRRPHPLANRFKSLLQCIHEEKQLLIPIQFCATVHIDTTDKSVHDLKHILLSKLGQSDNLIVILQSFGYKHGIPLDADYVFDVRHLPNPHWDLELRRFSGLDEPVKQFLEASPQANEMFEDILHFLKKWLPAFAEGHRHYMTISIGCTGGQHRSVYMVDRLKQALEAEWSVQVLHREMKHWS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MRD_A_6(1E6C)
AROL_DICCH
[Raw transfer]




32 HHSearch 61.0115% -17 - C2 -1E6C 3.0 AROL_DICCH
31 HHSearch 60.4923% -4 - C2 -3N2E - AROK_HELPY -
34 HHSearch 54.3620% -5 * C2 *4Y0A - ? -
21 HHSearch 54.1417% -13 - C2 -2IYV - AROK_MYCTU -
46 Fugue 53.5418% -32 - C2 -2UVQ - UCK1_HUMAN -
44 Fugue 52.9212% -18 - C2 -1XSE - DHI1_CAVPO -
25 HHSearch 52.0414% 12 - C2 -2VLI - ? -
39 HHSearch 50.8414% 23 - C2 -2AXP - YORR_BACSU -
28 HHSearch 50.0115% -5 - C2 -2RHM - ? -
36 HHSearch 49.7318% -72 - C2 -1KO5 - GNTK_ECOLI -
42 Fugue 49.5813%-126 - C2 -1JJV - COAE_HAEIN -
38 HHSearch 49.4914% 25 - C2 -3KB2 - YORR_BACSU -
33 HHSearch 48.0018% -20 - C2 -3T61 - ? -
27 HHSearch 47.1916% 47 - C2 -2PT5 - AROK_AQUAE -
35 HHSearch 46.3418% -55 - C2 -1KNQ - GNTK_ECOLI -
37 HHSearch 45.7615% -12 - C2 -5CB8 - CYSC_SYNY3 -
30 HHSearch 44.5517% 31 - C2 -3TRF - AROK_COXBU -
22 HHSearch 44.5321% 22 - C2 -1KAG - AROK_ECOLI -
45 Fugue 43.0012% 20 - C2 -1A4U - ADH_DROLE -
29 HHSearch 42.4417% 32 - C2 -3TRF - AROK_COXBU -