@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKV7: (2017-10-29 )
MSQTITLYVDGACRGNPGLGGWGAYVITEQGEHKLFGGEPDTTNNRMELTAAIEGISFCPPDAQLIVWTDSNYVKQGITEWIHGWKKKNWKDVKNPDLWQKLDAVCAGRNIEWNWIKGHAGHAGNEMADQLANLGADKTAQELKQPQSATVSQDIKKPEQDWLLDDPFGFDLVETTEDETITLEQTQEVEMIVVDEEMNVVEAVEQEEQQQNTNIHPQIVMTEAKLKLQGPRQLILDTETTGFYFQDGDRIIEVGAIEMINRKLTGSSIHIYINPEKPVGDSVQVHGITDEFLVDKPKYAEIADTLFEYLKGAEIIAHNATFDMNFLDMEFKRVGLPALSEVCEVTDTLALAKNKHPGQKNSLDALVRRYEIPARDRTFHGALLDAEILSDVYLAMTGGQVSFDMDALSQSESDQQKTTKARVQIELPVIYPSDEELNIHETWVKEFEKKHGEPCLFAK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TMP_A_5(1J53)
DPO3E_ECOLI
[Raw transfer]



U5P_A_4(2GUI)
DPO3E_ECOLI
[Raw transfer]



TMP_A_4(1J54)
DPO3E_ECOLI
[Raw transfer]



U5P_A_5(2GUI)
DPO3E_ECOLI
[Raw transfer]



TMP_A_4(1J54)
DPO3E_ECOLI
[Raw transfer]



U5P_A_5(2GUI)
DPO3E_ECOLI
[Raw transfer]



TMP_A_4(1J54)
DPO3E_ECOLI
[Raw transfer]



EDO_A_7(1J54)
DPO3E_ECOLI
[Raw transfer]



TMP_A_10(2IDO)
DPO3E_ECOLI
[Raw transfer]



EDO_C_12(2IDO)
DPO3E_ECOLI
[Raw transfer]



TMP_C_11(2IDO)
DPO3E_ECOLI
[Raw transfer]
1 PsiBlast_PDB 76.1846% 20 - C1 -5FKU - DPO3E_ECOLI -
9 PsiBlast_PDB 74.2547% -49 - C1 -4LY7 - ? -
65 HHSearch 74.1654% -2 - C1 -2GUI 2.7 DPO3E_ECOLI
54 Fugue 73.1749% 19 - C1 -5M1S - DPO3E_ECOLI -
3 PsiBlast_PDB 72.6452% 12 - C1 -2GUI 4.3 DPO3E_ECOLI
5 PsiBlast_PDB 72.1552% 11 - C1 -1J54 3.6 DPO3E_ECOLI
7 PsiBlast_PDB 72.0852% 5 - C1 -2XY8 - DPO3E_ECOLI -
53 Fugue 71.9954% 9 - C1 -1J54 3.8 DPO3E_ECOLI
4 PsiBlast_PDB 71.8952% 13 - C1 -1J53 2.7 DPO3E_ECOLI
58 Fugue 71.2553% -2 - C1 -1J54 3.6 DPO3E_ECOLI
21 PsiBlast_CBE 69.4652% 16 * C1 *2IDO 3.2 DPO3E_ECOLI
6 PsiBlast_PDB 68.2852% 4 - C1 -2IDO 3.2 DPO3E_ECOLI
15 PsiBlast_PDB 68.1049% -20 - C- -4Z0U - RNH_ECOLI -
12 PsiBlast_PDB 67.8749% -35 - C1 -1RCH - RNH_ECOLI -
14 PsiBlast_PDB 67.2649% -20 - C1 -2RN2 - RNH_ECOLI -
17 PsiBlast_PDB 67.1449% -20 - C1 -1RBU - RNH_ECOLI -
8 PsiBlast_PDB 66.7850% -14 - C1 -1F21 - RNH_ECOLI -
18 PsiBlast_PDB 66.1049% -19 - C1 -1RBR - RNH_ECOLI -
20 PsiBlast_PDB 66.0149% -20 - C1 -1RBT - RNH_ECOLI -
2 PsiBlast_PDB 65.4546% 24 - C1 -5M1S - DPO3E_ECOLI -