@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VKX4: (2017-10-30 )
MTDNATILQHVPVGKKVGIAFSGGLDTSAALLWMKQKGAEPYAYTANLGQPDEDDYDAIPKKAEQYGAVKARLIDCRLQLALEGIAAIQCGAFHISTGGVPYFNTTPLGRAVTGTMLVTAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPNLKIYKPWLDQNFIDELGGRAEMSQFLIDNGFDYKMSKEKAYSTDSNMLGATHEAKDLEYLNAGIKIVDPIMGVAFWKEEVEIKPEEVTIRFEEGVPVALNGQRFDNPVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYTIMNTESPNLTYEAERLTMEKGDSMFTPMDRIGQLTMRNLDITDTRAKLGIYTDAGLLSIGQGSALPQLDNKKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_Q_17(1KP2)
ASSY_ECOLI
[Raw transfer]



ATP_I_9(1KP3)
ASSY_ECOLI
[Raw transfer]



CIR_I_9(1K97)
ASSY_ECOLI
[Raw transfer]



ANP_A_3(4XFJ)
?
[Raw transfer]



CIR_A_4(2NZ2)
ASSY_HUMAN
[Raw transfer]



ASP_A_3(2NZ2)
ASSY_HUMAN
[Raw transfer]



ASP_E_5(1K97)
ASSY_ECOLI
[Raw transfer]



EPE_B_6(5US8)
ASSY_BORPE
[Raw transfer]
18 PsiBlast_CBE 90.0579% -72 - C3 -5US8 2.0 ASSY_BORPE
53 Fugue 89.6979% -73 - C3 -1K92 - ASSY_ECOLI -
30 HHSearch 89.5180% -73 - C3 -5US8 - ASSY_BORPE -
5 PsiBlast_PDB 89.3679% -73 - C3 -5US8 - ASSY_BORPE -
31 HHSearch 89.3579% -73 - C3 -1K92 - ASSY_ECOLI -
2 PsiBlast_PDB 89.1079% -74 - C3 -1K92 - ASSY_ECOLI -
1 PsiBlast_PDB 85.9379% -73 - C3 -1K97 3.4 ASSY_ECOLI
4 PsiBlast_PDB 85.5379% -74 - C3 -1KP3 6.2 ASSY_ECOLI
3 PsiBlast_PDB 79.6779% -73 - C3 -1KP2 5.2 ASSY_ECOLI
54 Fugue 75.3179% -7 - C3 -1K92 - ASSY_ECOLI -
19 PsiBlast_CBE 52.1532% -5 - C3 -4XFJ - ? -
8 PsiBlast_PDB 51.7528% -9 - C3 -2NZ2 3.2 ASSY_HUMAN
6 PsiBlast_PDB 51.2132% -1 - C3 -4U7J - ? -
33 HHSearch 50.6630% 4 - C3 -4XFJ - ? -
7 PsiBlast_PDB 50.5732% -4 - C3 -4XFJ 4.6 ?
20 PsiBlast_CBE 50.5232% -0 - C3 -4U7J - ? -
37 HHSearch 50.2928% -3 * C3 *2NZ2 - ASSY_HUMAN -
34 HHSearch 48.1631% -2 - C3 -1KH3 - ASSY_THET8 -
35 HHSearch 47.9331% -0 - C3 -1KOR - ASSY_THET8 -
32 HHSearch 46.1931% -5 - C3 -1VL2 - ASSY_THEMA -