@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VL23: (2017-10-30 )
MNQVELIQALPKAELHVHIEGTFEPELMFAIAQRNQIQIPYKSVEEVKQAYNFHNLQSFLDIYYAGANVLVHEQDFYDLAWAYFEKCAEDRVVHTEMFFDPQTHTDRGIAFATVINGLKRACADAKDKFGISSQLIMCFLRHLSEEAAFETLEQALPFKEDIIAVGLDSSEVGHPPAKFERVFAKAREEGFLIVAHAGEEGPPEYVWEALDLLKVNRIDHGVRSEEDEQLMARLINEKMPLTVCPLSNLKLCVVKDMKDHNIRRLLQKGVHVTVNSDDPSYFGGYMNDNFFAIQQALDLTNDELKQLAINSFEASFISDEEKQKWISEIQKI

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADE_A_4(3PAO)
ADE_PSEAE
[Raw transfer]



ADE_A_4(3PAO)
ADE_PSEAE
[Raw transfer]



ADE_A_4(3RYS)
?
[Raw transfer]



ADE_A_4(3RYS)
?
[Raw transfer]



ADE_B_6(3RYS)
?
[Raw transfer]



ES4_B_6(3PBM)
ADE_PSEAE
[Raw transfer]



HPA_A_4(3PAN)
ADE_PSEAE
[Raw transfer]



ES4_A_4(3PBM)
ADE_PSEAE
[Raw transfer]



UNL_A_7(4DZH)
?
[Raw transfer]
26 HHSearch 98.6363% -93 - C1 -3PAO 3.4 ADE_PSEAE
3 PsiBlast_PDB 98.5463% -93 - C1 -3PAO 3.4 ADE_PSEAE
2 PsiBlast_PDB 97.4863% -92 - C1 -3PAN 3.1 ADE_PSEAE
1 PsiBlast_PDB 97.1963% -90 - C1 -3OU8 - ADE_PSEAE -
27 HHSearch 96.5463% -89 - C1 -3PBM 3.3 ADE_PSEAE
4 PsiBlast_PDB 95.5663% -91 - C1 -3PBM 2.9 ADE_PSEAE
21 PsiBlast_CBE 93.4850% -98 - C1 -3RYS 3.5 ?
30 HHSearch 93.2549% -95 - C1 -3RYS 3.7 ?
5 PsiBlast_PDB 93.0550% -96 - C1 -3RYS 3.7 ?
44 Fugue 69.6827% 12 - C1 -1A4M - ADA_MOUSE -
24 HHSearch 68.3126% 1 - C1 -4GXW - ? -
22 HHSearch 68.2327% 7 - C1 -1ADD - ADA_MOUSE -
25 HHSearch 66.4026% 1 - C1 -4GXW - ? -
12 PsiBlast_PDB 65.5729% 6 - C1 -4GXW - ? -
10 PsiBlast_PDB 65.5326% 8 - C1 -3MVT - ADA_MOUSE -
8 PsiBlast_PDB 65.0726% 4 - C1 -1A4M - ADA_MOUSE -
11 PsiBlast_PDB 64.9526% 7 - C1 -3MVI - ADA_MOUSE -
7 PsiBlast_PDB 64.7626% 3 - C1 -1A4L - ADA_MOUSE -
6 PsiBlast_PDB 64.6726% 4 - C1 -2ADA - ADA_MOUSE -
23 HHSearch 64.5625% 11 - C1 -3IAR - ADA_HUMAN -