@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VL70: (2017-10-31 )
MAWQNVEVVHVVAMDKNHCIGKGNALPWHISADLKHFKEITQGGVVIMGRKTLESMGRALPNRVNWVITRDINWHFDGVKIAYSIEDALNAALEDAKNTEKQALFIIGGGEIFKQTLSIADRLELTHVDLDVQGDAHYPTIPSEFHKTASEQQVDEKSGTSFEFATYKK

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TOP_A_3(3TQ8)
?
[Raw transfer]




TOP_C_15(2W9S)
DYRA_STAAU
[Raw transfer]




TOP_A_9(2W9S)
DYRA_STAAU
[Raw transfer]




TOP_B_12(2W9S)
DYRA_STAAU
[Raw transfer]




9DR_B_10(3SAI)
?
[Raw transfer]




9DR_A_4(3SAI)
?
[Raw transfer]




EKB_A_4(3JWC)
?
[Raw transfer]




7DR_B_6(3SA2)
?
[Raw transfer]




EKB_B_6(3JWC)
?
[Raw transfer]




5WA_B_6(3JWF)
?
[Raw transfer]




TOP_A_3(3TQ8)
?
[Raw transfer]




XCF_X_3(3FYV)
DYR_STAAU
[Raw transfer]




5WB_A_4(3JWK)
?
[Raw transfer]




5WB_B_6(3JWK)
?
[Raw transfer]




N22_A_4(3E0B)
?
[Raw transfer]




FOL_A_9(5E8Q)
DYR_ECOLI
[Raw transfer]




M23_X_2(3SRS)
DYR_STAAU
[Raw transfer]




5WA_A_4(3JWF)
?
[Raw transfer]




TOP_A_4(3JW5)
?
[Raw transfer]




TOP_B_6(3JW5)
?
[Raw transfer]




FOL_A_3(3TQB)
?
[Raw transfer]




GOL_H_8(1ZDR)
?
[Raw transfer]




MTX_A_3(3TQ9)
?
[Raw transfer]




NDP_A_2(3TQB)
?
[Raw transfer]




NDP_A_2(3TQA)
?
[Raw transfer]




3 PsiBlast_PDB 91.6440%-159 - C3 -3TQA 12.0 ?
27 PsiBlast_CBE 91.5935%-142 - C3 -3JW3 - ? -
29 PsiBlast_CBE 90.4235%-139 - C3 -3JWF 5.4 ?
115 HHSearch 90.2241%-153 - C3 -3TQ8 4.5 ?
63 PsiBlast_CBE 89.8135%-137 - C3 -4ELF - ? -
57 PsiBlast_CBE 89.7835%-145 - C3 -4ELG - ? -
4 PsiBlast_PDB 89.5840%-177 - C3 -3TQB 11.9 ?
31 PsiBlast_CBE 89.5235%-139 - C3 -3JW5 4.2 ?
61 PsiBlast_CBE 89.3835%-140 - C3 -4ELF - ? -
19 PsiBlast_PDB 89.2434%-132 - C3 -3SAI 6.5 ?
9 PsiBlast_PDB 88.9535%-140 - C3 -3JW3 - ? -
16 PsiBlast_PDB 88.8634%-133 - C3 -3S9U - ? -
53 PsiBlast_CBE 88.6735%-145 - C3 -4ELG - ? -
72 PsiBlast_CBE 88.3635%-146 - C3 -4ELE - ? -
28 PsiBlast_CBE 88.3035%-138 - C3 -3JWK 4.9 ?
60 PsiBlast_CBE 88.2435%-144 - C3 -4ELF - ? -
128 HHSearch 88.2334%-131 * C3 *3S9U - ? -
2 PsiBlast_PDB 88.1440%-174 - C3 -3TQ9 8.2 ?
11 PsiBlast_PDB 87.9135%-142 - C3 -3JWC 5.4 ?
55 PsiBlast_CBE 87.9035%-140 - C3 -4ELG - ? -
1 PsiBlast_PDB 87.7140%-159 - C3 -3TQ8 4.5 ?
112 PsiBlast_CBE 81.4135%-167 - C3 -3SRS 5.6 DYR_STAAU
21 PsiBlast_CBE 81.3637%-141 - C3 -1ZDR 3.5 ?
105 PsiBlast_CBE 72.6634%-136 - C3 -2W9S 4.8 DYRA_STAAU
103 PsiBlast_CBE 72.4934%-132 - C3 -2W9S 4.6 DYRA_STAAU
104 PsiBlast_CBE 71.6734%-134 - C3 -2W9S 4.7 DYRA_STAAU