@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VL94: (2017-11-01 )
MENIMAYITLRDVQLAFGGPALLDGANFNLERGERVCLIGRNGEGKSTLLKLIEGSLLPDSGEVSVQNGLTVSMLAQDVPMSSGKVADNVAEGAGEAAAVLKAYHEASDACVLGDMEACDRMGSLQHKLDQLDGWALENKVNTILGKMELDPNADLADLSGGRKRRVLLARALLTQPDVLLLDEPTNHLDVESIEWLEKFLLDQNNLTLLFISHDRSFVDRLATRIVELDRGILRSYEGNYSRYLDLKAQQLEAEEKQNALFEKKLAEEEAWIRQGIKARRTRNEGRVRALKALREESKARRFQQGKVNMGVQEAQRSGKLVFDIEHLSVSYDGQTLIRDFSAIVMRGDRIGLVGDNGVGKTTLIKAILGEVQHEGVVKTGTQLEIAYFDQLRNQLDLEKSVSENVSEGSDFVDVNGQRRHILSYLQDFLFSPERARTPVKALSGGERNRVLLAKLLLKPSNLIVMDEPTNDLDMVTLELLEEMLSEYKGTLLLISHDRAFMDNVVTSTWVFDGKGGIAEYIGGYQDYLIQRPNERVVDQKGDVKKAQAKAEAEKNAAQTNVKKVKLSYKDQRELEQLPAEIEKLENEQAELSDKLADGSWFVTDADAATKASQRLAEIEELLLEKLERWDELEQKSKGN

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]



ATP_H_8(2FGJ)

[Raw transfer]



ANP_A_6(3B5Y)
MSBA_SALTY
[Raw transfer]



ANP_B_5(3B5Y)
MSBA_SALTY
[Raw transfer]



ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]



ADP_D_8(3B5Z)
MSBA_SALTY
[Raw transfer]
1 PsiBlast_PDB 78.5735% 10 - C3 -3J5S - ETTA_ECOLI -
2 PsiBlast_PDB 75.4135% 33 - C2 -4FIN - ETTA_ECOLI -
58 HHSearch 73.1435% 54 - C3 -3J5S - ETTA_ECOLI -
65 HHSearch 69.9428% 29 - C2 -2IW3 - EF3A_YEAST -
73 HHSearch 66.6228% 31 - C3 -2IX8 - -
6 PsiBlast_PDB 66.3627%-106 - C2 -2IW3 - EF3A_YEAST -
5 PsiBlast_PDB 62.6927% -96 - C2 -2IX8 - -
66 HHSearch 60.8722% 36 - C2 -5KO2 - MDR1A_MOUSE -
3 PsiBlast_PDB 59.8525% -33 - C2 -2IWH - EF3A_YEAST -
67 HHSearch 59.6123% 41 - C2 -5KO2 - MDR1A_MOUSE -
4 PsiBlast_PDB 59.3625% -29 - C2 -2IX3 - EF3A_YEAST -
10 PsiBlast_PDB 57.8528% -65 - C2 -4YMV - ? -
11 PsiBlast_PDB 57.6028% -64 - C2 -4YMW - ? -
9 PsiBlast_PDB 57.5728% -63 - C2 -4YMU - ? -
7 PsiBlast_PDB 57.5328% -59 - C2 -4YMS - ? -
8 PsiBlast_PDB 57.0428% -65 - C2 -4YMT - ? -
81 HHSearch 54.4130% -42 * C2 *3RLF - MALK_ECOLI -
79 HHSearch 53.9523% 13 - C3 -1YQT - ? -
20 PsiBlast_PDB 52.3428% -59 - C2 -2YYZ - ? -
82 HHSearch 52.2030% -35 - C2 -2AWN - MALK_ECOLI -
39 PsiBlast_CBE 35.9331% - - C2 -3B5Z 2.3 MSBA_SALTY
38 PsiBlast_CBE 35.9331% - - C2 -3B5Z 2.9 MSBA_SALTY
37 PsiBlast_CBE 35.9331% - - C2 -3B5Z 2.3 MSBA_SALTY
36 PsiBlast_CBE 35.9331% - - C2 -3B5Z 2.5 MSBA_SALTY