@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLA0: (2017-11-01 )
MKVGLVGWRGMVGSVLMQRMVEENDFAHIEPFYFSTSNAGGEAPSFGGKTAPALMEATDITSLKQMDVIITCQGGDYTSEVFPKLKATGWDGYWIDAASTLRMTDDAIIVLDPVNLNVIKDGLAKGTKTFVGGNCTVSLMLMGVGALFQNNLVEWMTAMTYQAASGAGAQNMRELLTGMGYLYNNTKTLLDDPKSAILDIDRQVAELQRGEGFPSANFGVPLAGSLIPYIDKQLESGQSKEEWKGLVETNKILGNSQIVPIDGHCVRIGAMRCHSQALNIKLKKDVPLDEIEDMIRNSNQWAKVVPNTREASMTDLTPVAVTGTLTVPVGRLRKLNMGKEYLGAFTVGDQLLWGAAEPLRRMLRILVEYKSS

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_B_7(3PZR)
DHAS1_VIBCH
[Raw transfer]



NDP_A_4(1GL3)
DHAS_ECOLI
[Raw transfer]



NAP_B_7(3PZR)
DHAS1_VIBCH
[Raw transfer]



NDP_F_6(1MB4)
DHAS1_VIBCH
[Raw transfer]



NDP_E_5(1MB4)
DHAS1_VIBCH
[Raw transfer]



NDP_A_4(1GL3)
DHAS_ECOLI
[Raw transfer]



NDP_B_5(1GL3)
DHAS_ECOLI
[Raw transfer]



4NO_A_5(4R5M)
DHAS1_VIBCH
[Raw transfer]



4NO_B_7(4R5M)
DHAS1_VIBCH
[Raw transfer]



NAP_B_6(4R5M)
DHAS1_VIBCH
[Raw transfer]



3GQ_A_6(4R3N)
?
[Raw transfer]



CYS_A_3(3Q0E)
DHAS1_VIBCH
[Raw transfer]



ART_A_2(1TA4)
DHAS_HAEIN
[Raw transfer]



NAP_A_4(4R5M)
DHAS1_VIBCH
[Raw transfer]



PEJ_C_3(1TB4)
DHAS_HAEIN
[Raw transfer]



CYS_B_7(3Q0E)
DHAS1_VIBCH
[Raw transfer]



NAP_A_5(3PZR)
DHAS1_VIBCH
[Raw transfer]



ART_A_3(1TA4)
DHAS_HAEIN
[Raw transfer]



CYS_B_4(3PZR)
DHAS1_VIBCH
[Raw transfer]



HSE_E_5(1PQP)
DHAS_HAEIN
[Raw transfer]
21 PsiBlast_CBE 91.4071% -69 - C3 -3UW3 - ? -
4 PsiBlast_PDB 90.6567%-116 - C3 -1T4D - DHAS_ECOLI -
5 PsiBlast_PDB 90.2767%-122 - C3 -1BRM - DHAS_ECOLI -
3 PsiBlast_PDB 89.5467%-115 - C3 -1T4B - DHAS_ECOLI -
25 PsiBlast_CBE 89.1167%-111 - C3 -1GL3 8.9 DHAS_ECOLI
6 PsiBlast_PDB 89.0567%-111 - C3 -1GL3 8.6 DHAS_ECOLI
1 PsiBlast_PDB 88.7971% -66 - C3 -3UW3 - ? -
2 PsiBlast_PDB 88.2268% -71 - C3 -5BNT - DHAS_PSEAE -
29 PsiBlast_CBE 88.1267% -73 - C3 -4R5M 7.4 DHAS1_VIBCH
32 PsiBlast_CBE 88.0567% -72 - C3 -3PZR 7.9 DHAS1_VIBCH
31 PsiBlast_CBE 87.6667% -75 - C3 -3Q0E 3.5 DHAS1_VIBCH
33 PsiBlast_CBE 87.5767% -71 - C3 -1MB4 9.4 DHAS1_VIBCH
19 PsiBlast_PDB 87.5467% -73 - C3 -3PZR 6.3 DHAS1_VIBCH
45 HHSearch 87.1867% -70 - C3 -3PZR 7.9 DHAS1_VIBCH
20 PsiBlast_PDB 86.9867% -76 - C3 -3Q0E 3.2 DHAS1_VIBCH
18 PsiBlast_PDB 86.7967% -71 - C3 -1MC4 - DHAS1_VIBCH -
22 PsiBlast_CBE 86.5468% -72 - C3 -5BNT - DHAS_PSEAE -
24 PsiBlast_CBE 86.4168% -64 - C3 -5BNT - DHAS_PSEAE -
23 PsiBlast_CBE 86.3268% -69 - C3 -5BNT - DHAS_PSEAE -
30 PsiBlast_CBE 86.2267% -75 - C3 -4R5M 7.4 DHAS1_VIBCH
34 PsiBlast_CBE 85.6067% -74 - C3 -1MB4 8.6 DHAS1_VIBCH
9 PsiBlast_PDB 82.8267% -75 - C3 -1TB4 3.2 DHAS_HAEIN
14 PsiBlast_PDB 81.9566% -73 - C3 -1PQP 2.3 DHAS_HAEIN
8 PsiBlast_PDB 80.9367% -76 - C3 -1TA4 Calc... DHAS_HAEIN
35 Fugue 78.6167% -27 - C3 -1GL3 8.9 DHAS_ECOLI