@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLA9: (2017-11-01 )
MSKQILILAGDGIGPEIVGAAEKVLNKVNEKFNLSLTWEHGLLGGAAIDAHGEPYPAVTSEQAKKADAILLGAVGGPKWDTIERSIRPERGLLKIRSELNLFANLRPAILYPQLADASSLKPEIVAGLDILIVRELTGGIYFGQPRGIRELENGEKQGYNTDVYSESEIKRIAKVAFELAGLRGGKVCSVDKANVLEVTELWKQTVTDLQQANYPNIQLSHMYVDNAAMQLVRAPKQFDVIVTGNLFGDILSDEAAMLTGSIGMLPSASLDENGKGMYEPCHGSAPDIAGQNVANPLATILSVAMMLRYTFREEAAAKAIEDAVGQVLDQGLRTADIMSEGMTKVGTAEMGEAVVAALA

Atome Classification :

(53 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_18(4WUO)
LEU3_THET8
[Raw transfer]



NAD_A_4(4WUO)
LEU3_THET8
[Raw transfer]



NAD_B_3(4XXV)
LEU3_BURTA
[Raw transfer]



NAD_X_2(3FMX)
TTUC_PSEPU
[Raw transfer]



NAD_B_3(4XXV)
LEU3_BURTA
[Raw transfer]



CIT_E_5(2D1C)
IDH_THET8
[Raw transfer]



GGG_B_7(3TY3)
LYS12_SCHPO
[Raw transfer]



NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]



GOL_B_4(4XXV)
LEU3_BURTA
[Raw transfer]



NAP_D_4(2D1C)
IDH_THET8
[Raw transfer]



CIT_F_6(2D1C)
IDH_THET8
[Raw transfer]



GGG_A_3(3TY3)
LYS12_SCHPO
[Raw transfer]



GOL_A_10(4WUO)
LEU3_THET8
[Raw transfer]



48Y_A_2(5HN4)
?
[Raw transfer]



IPM_B_6(1A05)
LEU3_ACIFR
[Raw transfer]



IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]



IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]



ICT_A_2(5HN5)
?
[Raw transfer]



IPM_A_3(2Y41)
LEU3_THET8
[Raw transfer]



GOL_B_12(3TY4)
LYS12_SCHPO
[Raw transfer]



IPM_A_2(3WZY)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VL3)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VL6)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3WZW)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VL7)
LEU3_SHEON
[Raw transfer]



IPM_B_5(2Y41)
LEU3_THET8
[Raw transfer]



IPM_A_2(3VL4)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VL2)
LEU3_SHEON
[Raw transfer]



IPM_B_9(4Y1P)
?
[Raw transfer]



IPM_A_2(5HN6)
?
[Raw transfer]



IPM_A_2(3VKZ)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VMJ)
LEU3_SHEON
[Raw transfer]



IPM_B_6(3VMK)
?
[Raw transfer]



IPM_A_2(3WZV)
?
[Raw transfer]



IPM_B_6(3VMK)
?
[Raw transfer]



IPM_A_3(3VMK)
?
[Raw transfer]



IPM_A_2(3WZX)
LEU3_SHEON
[Raw transfer]



IPM_A_2(3VML)
LEU3_SHEON
[Raw transfer]



GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]



NAD_A_2(1HEX)
LEU3_THET8
[Raw transfer]



2PE_A_4(2Y3Z)
LEU3_THET8
[Raw transfer]



DEI_A_3(2ZTW)
LEU3_THET8
[Raw transfer]



2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]



NAD_A_2(2ZTW)
LEU3_THET8
[Raw transfer]



EOH_B_19(4WUO)
LEU3_THET8
[Raw transfer]
137 HHSearch 89.6660% -94 * C7 *5J34 - LEU32_ARATH -
7 PsiBlast_PDB 89.4860% -98 - C7 -5J34 - LEU32_ARATH -
1 PsiBlast_PDB 89.0462%-108 - C7 -1A05 - LEU3_ACIFR -
139 HHSearch 88.6662%-107 - C7 -1A05 3.7 LEU3_ACIFR
4 PsiBlast_PDB 88.5860% -96 - C7 -3R8W - LEU32_ARATH -
34 PsiBlast_CBE 88.5360% -96 - C7 -5J32 - LEU32_ARATH -
21 PsiBlast_CBE 88.5262%-106 - C7 -1A05 3.7 LEU3_ACIFR
138 HHSearch 88.3460% -90 - C7 -5J32 - LEU32_ARATH -
25 PsiBlast_CBE 88.2960% -97 - C7 -5J33 - LEU32_ARATH -
30 PsiBlast_CBE 88.2560% -96 - C7 -5J33 - LEU32_ARATH -
35 PsiBlast_CBE 87.9460% -93 - C7 -5J32 - LEU32_ARATH -
24 PsiBlast_CBE 87.8360% -93 - C7 -5J33 - LEU32_ARATH -
6 PsiBlast_PDB 87.7760% -95 - C7 -5J32 - LEU32_ARATH -
5 PsiBlast_PDB 87.7760% -95 - C7 -5J33 - LEU32_ARATH -
36 PsiBlast_CBE 87.7460% -97 - C7 -5J32 - LEU32_ARATH -
8 PsiBlast_PDB 87.6458%-106 - C7 -3U1H - ? -
29 PsiBlast_CBE 87.5460% -95 - C7 -5J33 - LEU32_ARATH -
27 PsiBlast_CBE 87.2160% -96 - C7 -5J33 - LEU32_ARATH -
28 PsiBlast_CBE 87.1260% -92 - C7 -5J33 - LEU32_ARATH -
22 PsiBlast_CBE 86.6662% -51 - C7 -4XXV 7.9 LEU3_BURTA
144 HHSearch 85.0463% -39 - C7 -4XXV 7.9 LEU3_BURTA
136 HHSearch 81.9654%-101 - C7 -2Y3Z 3.0 LEU3_THET8
54 PsiBlast_CBE 81.4055%-110 - C7 -4WUO 7.6 LEU3_THET8
126 Fugue 81.2863% -15 - C7 -1A05 3.7 LEU3_ACIFR
50 PsiBlast_CBE 80.0555%-104 - C7 -1HEX 7.1 LEU3_THET8
17 PsiBlast_PDB 79.9455%-104 - C7 -2Y41 4.2 LEU3_THET8
53 PsiBlast_CBE 79.7555%-108 - C7 -4WUO 7.9 LEU3_THET8
47 PsiBlast_CBE 79.6955%-102 - C7 -2Y41 4.3 LEU3_THET8
15 PsiBlast_PDB 79.4955%-106 - C7 -2Y3Z 2.5 LEU3_THET8
49 PsiBlast_CBE 79.0955%-101 - C7 -2ZTW 4.7 LEU3_THET8
73 PsiBlast_CBE 78.2450% -13 - C7 -3WZX 4.1 LEU3_SHEON
52 PsiBlast_CBE 78.2451% -14 - C7 -3VMK 3.3 ?
72 PsiBlast_CBE 77.9650% -11 - C7 -3WZY 3.2 LEU3_SHEON
65 PsiBlast_CBE 77.6650% -11 - C7 -3VL7 3.0 LEU3_SHEON
64 PsiBlast_CBE 77.5750% -13 - C7 -3VMJ 3.2 LEU3_SHEON
70 PsiBlast_CBE 77.4750% -11 - C7 -3VKZ 3.3 LEU3_SHEON
66 PsiBlast_CBE 77.4650% -9 - C7 -3VL6 3.2 LEU3_SHEON
68 PsiBlast_CBE 77.3750% -11 - C7 -3VL3 3.2 LEU3_SHEON
51 PsiBlast_CBE 77.3551% -13 - C7 -3VMK 3.0 ?
67 PsiBlast_CBE 77.3250% -12 - C7 -3VL4 3.4 LEU3_SHEON
63 PsiBlast_CBE 77.1650% -15 - C7 -3WZV 4.2 ?
71 PsiBlast_CBE 77.0650% -16 - C7 -3VML 3.3 LEU3_SHEON
62 PsiBlast_CBE 77.0450% -10 - C7 -3WZW 3.2 LEU3_SHEON
69 PsiBlast_CBE 76.8750% -12 - C7 -3VL2 3.3 LEU3_SHEON
147 HHSearch 76.1750% -15 - C7 -3VMK 2.9 ?
110 PsiBlast_CBE 66.2235%-116 - C7 -5HN4 3.8 ?
108 PsiBlast_CBE 65.7935%-114 - C7 -5HN6 3.6 ?
109 PsiBlast_CBE 65.4635%-115 - C7 -5HN5 3.2 ?
90 PsiBlast_CBE 64.7837% -64 - C7 -4Y1P 4.0 ?
104 PsiBlast_CBE 63.3634% -16 - C7 -3TY4 3.4 LYS12_SCHPO
107 PsiBlast_CBE 62.8534% -16 - C7 -3TY3 2.5 LYS12_SCHPO
103 PsiBlast_CBE 62.5335% 8 - C7 -3FMX 6.5 TTUC_PSEPU
105 PsiBlast_CBE 62.4834% -16 - C7 -3TY4 2.9 LYS12_SCHPO