@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLE5: (2017-11-02 )
MEHIERESMEFDVVIVGAGPAGLSAAIKIRQLAIENNLPDLSVCVVEKGSEVGAHILSGAVLEPHAINELFPNWKEEGAPLNVPVTEDKTFFLLSETTSKEAPHWMVPKTMYNDGNYVISLGNVVRWLGQKAEELEVSIFPGFAASEVLYHENGTVKGIQTGDMGIGKDGEPTHNFTPGYELHAKYTLFAEGCRGHLGKRLIAKYNLDKDADPQHYGIGIKELWEIDPAKHKPGLVMHGAGWPLSETGSSGGWWLYHAENNQVTLGMIVDLSYENPHMYPFMEMQRWKTHPLIKQYLEGGKRISYGARAVVKGGFNSLPKLTFPGGCLIGDDAGFLNFAKIKGSHTAMKSGMLCGEAVFEAIAAGVEKGGDLAVARVTKGEDLFVKELTSYTEKFNNSWLKEELYNARNFGPAMHKFGQWIGGAFNFIDQNVFKVPFTLHDLKQDFAVLKTVDATSFKPTYPKPDGKLTFDRLSSVFISNTVHEENQPAHLKLTDPSIPVNVNLPKWDEPAQRYCPAGVYEIMENDDGSKRFQINAANCVHCKTCDIKDPSQNITWVTPEGGGGPNYPNM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_6(2GMJ)
ETFD_PIG
[Raw transfer]



FAD_A_8(2GMH)
ETFD_PIG
[Raw transfer]



FAD_A_8(2GMH)
ETFD_PIG
[Raw transfer]



FAD_B_11(2GMH)
ETFD_PIG
[Raw transfer]



FAD_B_11(2GMH)
ETFD_PIG
[Raw transfer]



FAD_A_4(2GMJ)
ETFD_PIG
[Raw transfer]



FAD_A_4(2GMJ)
ETFD_PIG
[Raw transfer]
1 PsiBlast_PDB 69.2552% -10 - C2 -2GMH 10.5 ETFD_PIG
21 PsiBlast_CBE 69.1752% -12 - C2 -2GMJ 12.5 ETFD_PIG
112 HHSearch 69.0454% -1 * C2 *2GMJ 9.8 ETFD_PIG
2 PsiBlast_PDB 68.9452% -10 - C2 -2GMJ 9.9 ETFD_PIG
22 PsiBlast_CBE 68.5052% -9 - C2 -2GMH 9.9 ETFD_PIG
136 Fugue 68.1354% 35 - C2 -2GMH 10.5 ETFD_PIG
113 HHSearch 68.0054% 1 - C2 -2GMH 9.9 ETFD_PIG
52 PsiBlast_CBE 40.3948%-245 - C1 -1PN0 - PHHY_TRICU -
53 PsiBlast_CBE 39.7548%-239 - C1 -1PN0 - PHHY_TRICU -
16 PsiBlast_PDB 39.5248%-239 - C1 -1PN0 - PHHY_TRICU -
51 PsiBlast_CBE 39.3548%-248 - C1 -1PN0 - PHHY_TRICU -
50 PsiBlast_CBE 38.8948%-223 - C1 -1FOH - PHHY_TRICU -
48 PsiBlast_CBE 38.3648%-232 - C1 -1FOH - PHHY_TRICU -
49 PsiBlast_CBE 37.8348%-237 - C1 -1FOH - PHHY_TRICU -
15 PsiBlast_PDB 37.3748%-236 - C1 -1FOH - PHHY_TRICU -
85 PsiBlast_CBE 36.3050%-274 - C1 -4DSH - ? -
88 PsiBlast_CBE 36.2043%-234 - C1 -3I6D - PPOX_BACSU -
11 PsiBlast_PDB 36.1739%-223 - C1 -2DKH - MOBA_COMTE -
89 PsiBlast_CBE 35.9843%-230 - C1 -3I6D - PPOX_BACSU -
84 PsiBlast_CBE 35.8750%-273 - C1 -4DSH - ? -