@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLG6: (2017-11-02 )
MRFEKFTNRLQQALSDAQSLAMGKDHTAIAGIHILSTLLEEPSNISLLQQAGARLPELKQKLEQALKDAPTIANPTGDVNLNPEAVKALNLADRYAQKAGDEFLSTDWVLLGLAETGETKNILSAVGVTPDSLRKVIENIRGSDKVMSNNHEDQRDSLNKYTIDLTERALSGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERLKAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKAEVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAARLQYGVIPELQKQLEQDEVAEENEEPKLIRTKVTENEIAEVVSAATGIPVAKMMQGEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSVVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGATDDEVRTIVMNAVSQHFRPEFINRIDELVIFHSLKKVQIRGIADIQLDRLRSRLVDRDMSLTVDDSAFDLLIDAGFDPVYGARPLKRAIQQQVENTLAQKILSGDFVAGDTILVKGENGHLVFDKLKLS

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MNT_C_8(4LJ7)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



ACP_A_2(4LJA)

[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



ADP_A_2(4LJ5)

[Raw transfer]



MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]



ADP_D_6(4FD2)

[Raw transfer]



ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]
65 Fugue 98.6555% 0 - C- -1QVR - CLPB_THET8 -
32 PsiBlast_CBE 90.3743% 0 - C- -5VY9 - ? -
29 PsiBlast_CBE 90.3743% 0 - C- -5VY9 - ? -
28 PsiBlast_CBE 90.3743% 0 - C- -5VY9 - ? -
9 PsiBlast_PDB 90.3743% 0 - C- -5VY9 - ? -
31 PsiBlast_CBE 76.6543% 0 - C- -5VY9 - ? -
30 PsiBlast_CBE 76.6543% 0 - C- -5VY9 - ? -
36 PsiBlast_CBE 74.2743% 0 - C- -5VY8 - ? -
35 PsiBlast_CBE 74.2743% 0 - C- -5VY8 - ? -
34 PsiBlast_CBE 74.2743% 0 - C- -5VY8 - ? -
76 HHSearch 69.8351% 42 - C2 -3J3U - CLPC_BACSU -
4 PsiBlast_PDB 69.6146% 37 - C2 -3J3U - CLPC_BACSU -
77 HHSearch 69.2550% - - C2 -3PXI - CLPC_BACSU -
1 PsiBlast_PDB 69.1746% 38 - C2 -3J3S - CLPC_BACSU -
3 PsiBlast_PDB 68.0046% 36 - C2 -3J3R - CLPC_BACSU -
2 PsiBlast_PDB 67.2246% 39 - C2 -3J3T - CLPC_BACSU -
10 PsiBlast_PDB 66.6744% - - C2 -3PXI - CLPC_BACSU -
22 PsiBlast_CBE 65.8543% 51 - C2 -5KNE - HS104_YEAST -
21 PsiBlast_CBE 61.9443% -6 - C2 -5KNE - HS104_YEAST -
42 PsiBlast_CBE 61.6143% 0 - C- -5VJH - ? -
13 PsiBlast_PDB 57.6564% -84 - C2 -4LJ5 6.8
14 PsiBlast_PDB 56.8864% -79 - C2 -4LJ7 9.5 CLPB_THET8
15 PsiBlast_PDB 56.8764% -75 - C2 -4LJ9 6.8
45 PsiBlast_CBE 56.7564% -87 - C2 -4LJ7 6.9 CLPB_THET8
80 HHSearch 56.5764% -70 * C2 *4LJ9 6.8
16 PsiBlast_PDB 56.3564% -80 - C2 -4LJA 7.2
47 PsiBlast_CBE 56.0864% -90 - C2 -4FD2 6.9 CLPB_THET8
20 PsiBlast_PDB 56.0163% -87 - C2 -4FCW 7.5 CLPB_THET8
46 PsiBlast_CBE 55.4264% -86 - C2 -4FD2 6.5
44 PsiBlast_CBE 55.3664% -85 - C2 -4LJ7 7.4
18 PsiBlast_PDB 55.3064% -85 - C2 -4FD2 7.1 CLPB_THET8
82 HHSearch 55.1964% -76 - C2 -4FCV 6.7 CLPB_THET8
19 PsiBlast_PDB 54.8263% -79 - C2 -4FCV 6.7 CLPB_THET8