@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLJ2: (2017-11-03 )
MELRHLRYFVAVVEEQSFTKAAEKLFIAQPPLSRQIQNLESELGIQLFERGSRPLQTTPAGHFFYQHAVKLLSNAEEIKSMTKRIGLIERSMTIGFVGSLLYGLLPRIIYLFRQQQPHLNIQLMELSTTEQLQALKEGRIDVGFGRLRISDPAVRRILLRKERLVVAAHTSHPIAQRTEGVYLADLIDEKMFMYPTSLKPNFSTQLLNIFAEHSLVPKNMHEIREIQLALGLVAAGEGICIIPASADTIRFPHLNYIPILDNGAVSPIFITARAMDRSEDLQSLFDCIYQVYDLEGIPYQRTVFTLDQNPIDDSNGIDF

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CCU_A_5(3GLB)
CATM_ACIAD
[Raw transfer]




CCU_A_3(2F7C)
CATM_ACIAD
[Raw transfer]




CCU_D_14(3GLB)
CATM_ACIAD
[Raw transfer]




CCU_C_12(3GLB)
CATM_ACIAD
[Raw transfer]




CCU_B_5(2F7A)
BENM_ACIAD
[Raw transfer]




CCU_B_7(3GLB)
CATM_ACIAD
[Raw transfer]




BEZ_A_4(2F8D)
BENM_ACIAD
[Raw transfer]




BEZ_B_6(2F78)
BENM_ACIAD
[Raw transfer]




BEZ_A_5(2F78)
BENM_ACIAD
[Raw transfer]




PG4_A_3(2F97)
BENM_ACIAD
[Raw transfer]




22 PsiBlast_CBE 86.7964%-115 - C2 -3K1M - BENM_ACIAD -
3 PsiBlast_PDB 86.5664%-115 - C2 -3K1M - BENM_ACIAD -
1 PsiBlast_PDB 85.2964%-116 - C2 -3K1N - BENM_ACIAD -
21 PsiBlast_CBE 85.0964%-110 - C2 -3K1N - BENM_ACIAD -
2 PsiBlast_PDB 80.7264%-100 - C- -3K1P - BENM_ACIAD -
67 HHSearch 71.5359%-116 - C2 -2H98 - CATM_ACIAD -
5 PsiBlast_PDB 69.3364%-104 - C2 -2H9B - BENM_ACIAD -
69 HHSearch 69.1565%-103 - C2 -2H9B - BENM_ACIAD -
6 PsiBlast_PDB 69.1159%-119 - C2 -2H98 - CATM_ACIAD -
4 PsiBlast_PDB 68.9864%-100 - C2 -2H99 - BENM_ACIAD -
12 PsiBlast_PDB 68.7957%-106 - C2 -2F6P - BENM_ACIAD -
8 PsiBlast_PDB 68.7758%-101 - C2 -2F78 3.2 BENM_ACIAD
27 PsiBlast_CBE 68.4458%-109 - C2 -2F78 3.4 BENM_ACIAD
10 PsiBlast_PDB 68.3058%-105 - C2 -2F8D 3.1 BENM_ACIAD
15 PsiBlast_PDB 68.1254%-123 - C2 -3GLB 3.8 CATM_ACIAD
24 PsiBlast_CBE 67.9764%-101 - C2 -2H99 - BENM_ACIAD -
9 PsiBlast_PDB 67.6658%-104 - C2 -2F7A - BENM_ACIAD -
31 PsiBlast_CBE 67.4054%-115 - C2 -3GLB 4.0 CATM_ACIAD
25 PsiBlast_CBE 67.3758% -98 - C2 -2F8D - BENM_ACIAD -
7 PsiBlast_PDB 67.3358%-104 - C2 -2F6G - BENM_ACIAD -
26 PsiBlast_CBE 67.0358%-102 - C2 -2F7A 4.7 BENM_ACIAD
29 PsiBlast_CBE 66.9154%-119 - C2 -3GLB 3.6 CATM_ACIAD
11 PsiBlast_PDB 66.7958% -99 - C2 -2F97 2.5 BENM_ACIAD
30 PsiBlast_CBE 66.0254%-120 - C2 -3GLB 3.6 CATM_ACIAD
14 PsiBlast_PDB 64.9854%-112 - C2 -2F7C 4.0 CATM_ACIAD