@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLK4: (2017-11-03 )
MIQFKNISKHYQLKGQTIRALDQINLEIPEGSIFGIIGYSGAGKSTLIRLINLLERPNEGQVIINQKDFTALDARSLRQERANIGMIFQHFNLLQTKTVAENIEMPMRLLNYSKAEREKRLNESLEFIDLKHKKDAYPDELSGGQKQRVGIARALANHPKILLCDEATSALDPQTTKSVLELLKKINQEQKITIVMVTHEMDVIETVCDHVAVMEAGKVIEQGSTIDIFSNPQHPTTKNFIQTVLHQQLPVNILNQLENQHHHSIYCLQFLGRSAQEPVIQSLIKQFDISLNILFANMTEINGTVIGQMFVQLLGDPQLIRQAIEFLEKNEVSVVQSGDQV

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
151 HHSearch 92.5345%-110 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 91.8345%-119 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 91.7445%-110 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 91.4945%-113 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 91.4145%-121 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 91.2045%-116 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 90.5345%-106 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 90.1045%-111 - C1 -3TUI - METN_ECOLI -
21 PsiBlast_CBE 88.9845%-117 - C1 -3TUZ - METN_ECOLI -
150 HHSearch 88.1145%-106 - C1 -3DHW - METN_ECOLI -
1 PsiBlast_PDB 87.4545%-109 - C1 -3DHW - METN_ECOLI -
4 PsiBlast_PDB 85.7443%-117 - C1 -3TUJ - METN_ECOLI -
140 Fugue 78.5845% -10 - C1 -3TUZ - METN_ECOLI -
90 PsiBlast_CBE 61.4832%-133 - C1 -3PUX - MALK_ECOLI -
92 PsiBlast_CBE 61.4532%-137 - C1 -3PUV - MALK_ECOLI -
98 PsiBlast_CBE 60.7432%-131 - C1 -2AWN - MALK_ECOLI -
87 PsiBlast_CBE 60.3632%-139 - C1 -3PUZ - MALK_ECOLI -
91 PsiBlast_CBE 60.3332%-133 - C1 -3PUW - MALK_ECOLI -
86 PsiBlast_CBE 60.0832%-138 - C1 -3RLF - MALK_ECOLI -
5 PsiBlast_PDB 59.8542% -46 - C1 -4U00 6.2 ?
16 PsiBlast_PDB 58.6239% -58 - C1 -4YMV 5.1 ?
41 PsiBlast_CBE 58.2539% -57 - C1 -4YMU 6.0 ?
15 PsiBlast_PDB 58.1239% -53 - C1 -4YMU 5.7 ?
40 PsiBlast_CBE 57.8039% -58 - C1 -4YMV 5.0 ?
7 PsiBlast_PDB 54.7844% 13 - C1 -3C41 5.5 ?
154 HHSearch 53.9530%-121 - C1 -3FVQ 7.6 FBPC_NEIG1
43 PsiBlast_CBE 40.5143% -9 - C1 -3TIF 3.8 Y796_METJA
20 PsiBlast_PDB 38.8443% 9 - C1 -1F3O 6.1 Y796_METJA
139 PsiBlast_CBE 22.2133% - - C1 -3B5Z 2.3 MSBA_SALTY