@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLL6: (2017-11-03 )
MNSIPSVEIDSSDHVAKTTKTTCPYCGVGCGVSVNVQQKPQGPVVQVEGDAEHPSNFGRLCIKGSRLADTLGLETRVLQPMMGRKADRVVTTWDAAINKIADKFQSCIDNYGRDSIAFYVSGQLLTEDYYVVNKFVKGYLGTANIDTNSRLCMSSAVAGHKRSFGEDLVPASYEDFEHSDMVVLVGSNTAWCHPVLYQRIMQAKSHNPDMFVVVIDPRFTSTCEQADLHLPILPGQDVALFNGLFQYLYQNGHADQDFVDAYTEGLQEVLASSEAEANVEYVAKRTGIALDKLQQFFEKFAQTEKVITLFSMGVNQSSQGVNKANSIINCHLLTGKIGKLGAAPFSMTGQPNAMGGREVGGLANMLAAHMDLDNPLHQEVVQTFWDSPFIATQAGLKAVDLFRAVEAGKIKAIWIMATNPVVSLPDADQVKRALEKCELVVVSDICADTDTTAYADILLPALGWGEKDGTVTNSERRISRQRAFLPAPGEAKADWWAMSQVAKKLGFKGFDFNSAVDIFNEHAALSAQDNADINTREQTDTFRYFNLKGLMSLSTAEYDALQPVQWPVWDKKQDAKAVQQLFGKGQFSHKNAKAKLIATVAINPVHAISEDYPLILNTGRIRDQWHTMNRTGLSPNLTSHRAEPFCEIHPSDALKFGVRDQGLVEVRSKWGSCVLRVTFSSGVRRGQIFAPIHWTEQVASDARIGKVVNPEVDAISGEPEFKHTPVTIQLFYTTWQGVLYIREGYDSHIQESLHHCAWWTKVKMVKTNRYELADRQTFHDTQKNLKSFLPFADETFEWLSIEDISSQLSHSIILKDGIVIASLYIAPPDLLPDRDWVASMFKRERLSALHRKALLAGMPMSATNNDGPLVCGCFKVGKNKIIEAIKTQNITHEKQVTACLKAGGNCGSCLPEIRGLIKACQQEVEV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MGD_A_5(2JIQ)
NAPA_DESDA
[Raw transfer]



MGD_A_5(2JIO)
NAPA_DESDA
[Raw transfer]



SF4_A_2(2NAP)
NAPA_DESDA
[Raw transfer]



SF4_A_2(2V45)
NAPA_DESDA
[Raw transfer]



SF4_A_3(3ML1)
NAPA_CUPNH
[Raw transfer]



MO_A_3(2JIQ)
NAPA_DESDA
[Raw transfer]



MO_A_3(2V45)
NAPA_DESDA
[Raw transfer]



MO_A_3(2JIO)
NAPA_DESDA
[Raw transfer]



MO_A_3(2JIP)
NAPA_DESDA
[Raw transfer]



MO_A_3(2JIR)
NAPA_DESDA
[Raw transfer]



MO_A_3(2V3V)
NAPA_DESDA
[Raw transfer]



MO_A_3(2NAP)
NAPA_DESDA
[Raw transfer]



MO_A_3(2JIM)
NAPA_DESDA
[Raw transfer]
33 Fugue 82.0522% 0 - C- -1G8K - AIOA_ALCFA -
56 HHSearch 80.9723% 0 - C- -1G8K - AIOA_ALCFA -
50 HHSearch 71.3833% 5 - C3 -2NAP 4.3 NAPA_DESDA
48 HHSearch 71.3232% 8 - C3 -3ML1 - NAPA_CUPNH -
49 HHSearch 71.1733% 6 - C3 -2V45 4.1 NAPA_DESDA
54 HHSearch 70.2932% 4 - C3 -2NYA - NAPA_ECOLI -
1 PsiBlast_PDB 69.9132% 9 - C3 -2JIO 11.6 NAPA_DESDA
8 PsiBlast_PDB 69.8832% 9 - C3 -2V45 2.8 NAPA_DESDA
2 PsiBlast_PDB 69.8532% 11 - C3 -2JIQ 11.4 NAPA_DESDA
7 PsiBlast_PDB 69.5632% 10 - C3 -2JIR 2.8 NAPA_DESDA
6 PsiBlast_PDB 69.4732% 10 - C3 -2JIP 2.8 NAPA_DESDA
4 PsiBlast_PDB 69.1132% 10 - C3 -2NAP 2.8 NAPA_DESDA
3 PsiBlast_PDB 69.0132% 8 - C3 -2V3V 2.8 NAPA_DESDA
5 PsiBlast_PDB 68.7032% 11 - C3 -2JIM 2.8 NAPA_DESDA
10 PsiBlast_PDB 68.6529% 10 - C3 -3ML1 4.2 NAPA_CUPNH
9 PsiBlast_PDB 66.8429% 17 - C3 -2NYA - NAPA_ECOLI -
11 PsiBlast_PDB 66.4327% 5 - C3 -1OGY - NAPA_RHOS4 -
13 PsiBlast_PDB 65.8922% 0 - C- -1G8K - AIOA_ALCFA -
58 HHSearch 62.1324% 9 - C3 -4AAY - ? -
45 HHSearch 54.4820% -2 - C3 -2E7Z - AHY_PELAE -