@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLM0: (2017-11-03 )
MSKMKSPILRLRRLRRTKAIRGLLCENNFSVEDLVQPIFIEESITQPIPISTMPGIYRLPEQDIEQEVKALYALGIRCVMPFGISHHKDSMGSDTWSDTGLLVRMIKAIKSSCPEMIVTPDICFCEYTTHGHCGVMIHDQISNDLTVENLIKQSLAAAKAGADMLAPSGMMDGQVGAIREALDQAGYHNVLIMAHAIKFASALYGPFRVAVDSNLVGDRHSYQLDYANTRQALREAALDESEGADLLIVKPGMFYLDILSQLRAQTKLPLAAYQVGGEYAAIKFAAIAKALDERKTVIESITAFKRAGADVIITYFAKDIAIWHNEF

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PBG_A_2(5MHB)
HEM2_ECOLI
[Raw transfer]




PBG_A_3(1E51)
HEM2_HUMAN
[Raw transfer]




PBG_A_4(1OHL)
HEM2_YEAST
[Raw transfer]




GOL_A_8(5MHB)
HEM2_ECOLI
[Raw transfer]




FMT_A_5(1W5M)
HEM2_PSEAE
[Raw transfer]




FMT_A_6(1W5P)
HEM2_PSEAE
[Raw transfer]




FMT_B_8(1W5N)
HEM2_PSEAE
[Raw transfer]




FMT_B_9(1W5Q)
HEM2_PSEAE
[Raw transfer]




4OX_A_2(1GJP)
HEM2_YEAST
[Raw transfer]




FMT_A_3(1W56)
HEM2_PSEAE
[Raw transfer]




KAH_A_2(1H7P)
HEM2_YEAST
[Raw transfer]




FMT_B_7(1W56)
HEM2_PSEAE
[Raw transfer]




GOL_B_22(1W5P)
HEM2_PSEAE
[Raw transfer]




SHF_A_8(1B4E)
HEM2_ECOLI
[Raw transfer]




FMT_B_10(1W5M)
HEM2_PSEAE
[Raw transfer]




FMT_B_9(1W5Q)
HEM2_PSEAE
[Raw transfer]




DSB_B_8(1I8J)
HEM2_ECOLI
[Raw transfer]




FMT_B_14(1W5P)
HEM2_PSEAE
[Raw transfer]




FMT_A_3(1W5N)
HEM2_PSEAE
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




DSB_A_7(1I8J)
HEM2_ECOLI
[Raw transfer]




SHF_A_2(1H7N)
HEM2_YEAST
[Raw transfer]




PB1_A_5(1PV8)
HEM2_HUMAN
[Raw transfer]




AYC_A_2(2WOQ)
HEM2_PSEAE
[Raw transfer]




DAV_A_5(5HNR)
HEM2_HUMAN
[Raw transfer]




DSB_B_6(2C1H)
HEM2_CHLP8
[Raw transfer]




DSB_B_6(2C1H)
HEM2_CHLP8
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




SHF_A_5(1B4K)
HEM2_PSEAE
[Raw transfer]




SHU_A_2(1H7R)
HEM2_YEAST
[Raw transfer]




DAV_A_2(1H7O)
HEM2_YEAST
[Raw transfer]




SHF_B_5(1W1Z)
HEM2_CHLP8
[Raw transfer]




SHF_A_3(1YLV)
HEM2_YEAST
[Raw transfer]




DSB_A_2(1EB3)
HEM2_YEAST
[Raw transfer]




DSB_A_2(1EB3)
HEM2_YEAST
[Raw transfer]




DSB_A_4(2C1H)
HEM2_CHLP8
[Raw transfer]




SHO_A_2(1W31)
HEM2_YEAST
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




DSB_A_7(1L6S)
HEM2_ECOLI
[Raw transfer]




4OX_A_7(1L6Y)
HEM2_ECOLI
[Raw transfer]




2 PsiBlast_PDB 90.3754%-112 - C7 -1L6S 2.9 HEM2_ECOLI
3 PsiBlast_PDB 89.8554%-115 - C7 -1L6Y 3.2 HEM2_ECOLI
4 PsiBlast_PDB 89.5754%-110 - C7 -1I8J 2.3 HEM2_ECOLI
5 PsiBlast_PDB 89.2654%-112 - C7 -1B4E 3.1 HEM2_ECOLI
21 PsiBlast_CBE 88.9554%-111 - C7 -1I8J 2.3 HEM2_ECOLI
1 PsiBlast_PDB 88.7554%-115 - C7 -5MHB 6.6 HEM2_ECOLI
90 HHSearch 87.1053% -88 - C7 -1L6S 2.9 HEM2_ECOLI
87 HHSearch 84.9943% -96 * C7 *2C1H 2.1 HEM2_CHLP8
14 PsiBlast_PDB 83.1943%-101 - C7 -2C1H 2.5 HEM2_CHLP8
46 PsiBlast_CBE 82.9043% -98 - C7 -2C1H 2.1 HEM2_CHLP8
13 PsiBlast_PDB 81.6643% -97 - C7 -1W1Z - HEM2_CHLP8 -
25 PsiBlast_CBE 80.3443% -48 - C7 -1W5N 3.4 HEM2_PSEAE
60 PsiBlast_CBE 79.7238% -61 - C7 -1H7R 2.6 HEM2_YEAST
26 PsiBlast_CBE 79.7043% -45 - C7 -1W5M 3.4 HEM2_PSEAE
91 HHSearch 79.3844% -42 - C7 -5LZL - ? -
22 PsiBlast_CBE 79.2944% -36 - C7 -1W5Q 3.5 HEM2_PSEAE
8 PsiBlast_PDB 79.2543% -46 - C7 -1W5N 3.3 HEM2_PSEAE
24 PsiBlast_CBE 79.1343% -46 - C7 -1W5O - HEM2_PSEAE -
88 HHSearch 79.0644% -35 - C7 -1W5Q 3.5 HEM2_PSEAE
6 PsiBlast_PDB 79.0143% -41 - C7 -1W5P 3.3 HEM2_PSEAE
47 PsiBlast_CBE 78.8443% -92 - C7 -1W1Z 3.4 HEM2_CHLP8
93 HHSearch 78.3737% -57 - C7 -1H7N 3.2 HEM2_YEAST
27 PsiBlast_CBE 78.0943% -45 - C7 -1W56 3.5 HEM2_PSEAE
9 PsiBlast_PDB 78.0643% -22 - C7 -1W56 3.2 HEM2_PSEAE
53 PsiBlast_CBE 77.7438% -58 - C7 -1H7O 3.1 HEM2_YEAST
54 PsiBlast_CBE 77.6638% -58 - C7 -1GJP 1.9 HEM2_YEAST
23 PsiBlast_CBE 77.6043% -39 - C7 -1W5P 3.4 HEM2_PSEAE
62 PsiBlast_CBE 77.3638% -58 - C7 -1H7N 3.2 HEM2_YEAST
59 PsiBlast_CBE 77.3038% -57 - C7 -1OHL 3.7 HEM2_YEAST
77 Fugue 77.2142% -36 - C7 -1B4K 3.3 HEM2_PSEAE
55 PsiBlast_CBE 77.2138% -58 - C7 -1EB3 2.6 HEM2_YEAST
61 PsiBlast_CBE 77.1738% -58 - C7 -1H7P 3.2 HEM2_YEAST
56 PsiBlast_CBE 77.0938% -60 - C7 -1W31 2.5 HEM2_YEAST
16 PsiBlast_PDB 77.0142% -19 - C7 -2WOQ 3.2 HEM2_PSEAE
10 PsiBlast_PDB 76.8043% -21 - C7 -1W5M 3.3 HEM2_PSEAE
52 PsiBlast_CBE 76.4038% -55 - C7 -1YLV 3.1 HEM2_YEAST
94 HHSearch 76.3837% -58 - C7 -1EB3 2.9 HEM2_YEAST
15 PsiBlast_PDB 75.9842% -17 - C7 -1B4K 3.3 HEM2_PSEAE
20 PsiBlast_PDB 74.2140% -47 - C7 -1E51 3.6 HEM2_HUMAN
49 PsiBlast_CBE 73.4440% -45 - C7 -5HNR 2.4 HEM2_HUMAN
19 PsiBlast_PDB 71.7940%-108 - C7 -1PV8 1.8 HEM2_HUMAN