@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLU6: (2017-11-04 )
MSGSTITPWVVGNWKMNPMRANANQLIEEFKQLLQQNQIADENCHVGVAPVSIALTTVQAQLQDAARTVYTVAQDVSRVAGTGAYTGEVSAELLKDSQINFVLVGHSERRDIFGDNVEILKAKLQNALNAGMTVIYCVGESLEQREQGQAEQVVLQQICDIAPVVTAEQWQNQVVIAYEPIWAIGTGKTASPQDAQAMHAKIREGLCQLTPAGSNIAILYGGSVKAENAVELAACPDINGALVGGASLNAASFYQIVQAFAQSK

Atome Classification :

(77 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PGH_B_4(1TPW)
TPIS_CHICK
[Raw transfer]




G3P_B_5(3UWU)
TPIS_STAAR
[Raw transfer]




PGH_A_3(1TPW)
TPIS_CHICK
[Raw transfer]




3PG_A_3(2VFI)
TPIS_PLAFA
[Raw transfer]




PGA_C_3(1SW3)
TPIS_CHICK
[Raw transfer]




PGA_D_4(1SW3)
TPIS_CHICK
[Raw transfer]




G3P_A_3(3UWU)
TPIS_STAAR
[Raw transfer]




3PG_A_3(2VFH)
TPIS_PLAFA
[Raw transfer]




PGA_B_4(5EYW)
?
[Raw transfer]




PGH_A_3(1TPU)
TPIS_CHICK
[Raw transfer]




PGA_A_2(1LYX)
TPIS_PLAFA
[Raw transfer]




3PG_B_4(2VFH)
TPIS_PLAFA
[Raw transfer]




PEP_B_4(4OWG)
TPIS_RABIT
[Raw transfer]




3PG_C_3(1M7O)
TPIS_PLAFA
[Raw transfer]




PGA_A_3(5EYW)
?
[Raw transfer]




PGA_D_4(2BTM)
TPIS_GEOSE
[Raw transfer]




129_C_3(1IF2)
TPIS_LEIME
[Raw transfer]




PEP_A_3(4OWG)
TPIS_RABIT
[Raw transfer]




PGA_B_4(1BTM)
TPIS_GEOSE
[Raw transfer]




PGH_B_4(1TPU)
TPIS_CHICK
[Raw transfer]




PGA_B_3(1HTI)
TPIS_HUMAN
[Raw transfer]




G2H_A_3(3UWZ)
TPIS_STAAR
[Raw transfer]




3PG_B_5(2VFI)
TPIS_PLAFA
[Raw transfer]




PGA_F_6(1LZO)
TPIS_PLAFA
[Raw transfer]




3PG_B_6(3UWW)
TPIS_STAAR
[Raw transfer]




G3H_D_4(1M7P)
TPIS_PLAFA
[Raw transfer]




3PG_D_4(1M7O)
TPIS_PLAFA
[Raw transfer]




G3H_C_3(1M7P)
TPIS_PLAFA
[Raw transfer]




GOL_A_4(2VFE)
TPIS_PLAFA
[Raw transfer]




PGH_B_4(3YPI)
TPIS_YEAST
[Raw transfer]




PGA_E_5(1LZO)
TPIS_PLAFA
[Raw transfer]




GOL_B_6(2VFE)
TPIS_PLAFA
[Raw transfer]




GOL_A_3(4HHP)
?
[Raw transfer]




3PG_A_4(3UWW)
TPIS_STAAR
[Raw transfer]




TRS_H_8(2I9E)
?
[Raw transfer]




G2H_B_5(3UWZ)
TPIS_STAAR
[Raw transfer]




2PG_B_7(3UWV)
TPIS_STAAR
[Raw transfer]




UVW_A_4(4MVA)
?
[Raw transfer]




2PG_B_5(1O5X)
TPIS_PLAFA
[Raw transfer]




2PG_A_5(3UWV)
TPIS_STAAR
[Raw transfer]




UVW_A_4(4MVA)
?
[Raw transfer]




3PY_A_4(1O5X)
TPIS_PLAFA
[Raw transfer]




EDO_B_16(4Z0J)
TPIS_PLAFA
[Raw transfer]




EDO_A_4(4ZZ9)
TPIS_PLAFA
[Raw transfer]




EDO_B_7(4ZZ9)
TPIS_PLAFA
[Raw transfer]




EDO_A_3(4Z0S)
TPIS_PLAFA
[Raw transfer]




EDO_C_14(5BMX)
TPIS_PLAFA
[Raw transfer]




EDO_A_3(3PSW)
TPIS_PLAFA
[Raw transfer]




EDO_A_5(5BMX)
TPIS_PLAFA
[Raw transfer]




EDO_A_4(3PSV)
TPIS_PLAFA
[Raw transfer]




EDO_B_11(5BMX)
TPIS_PLAFA
[Raw transfer]




EDO_B_12(5BMW)
TPIS_PLAFA
[Raw transfer]




EDO_D_18(5BMX)
TPIS_PLAFA
[Raw transfer]




EDO_A_6(5BMW)
TPIS_PLAFA
[Raw transfer]




EDO_B_9(4YWI)
TPIS_PLAFA
[Raw transfer]




PEG_B_9(4MVA)
?
[Raw transfer]




EDO_B_7(3PSW)
TPIS_PLAFA
[Raw transfer]




EDO_A_5(4YXG)
TPIS_PLAFA
[Raw transfer]




MRD_A_2(4MKN)
?
[Raw transfer]




MRD_A_2(4MKN)
?
[Raw transfer]




TRS_I_9(2I9E)
?
[Raw transfer]




17 PsiBlast_PDB 89.1943% -96 - C7 -4Y96 - ? -
131 HHSearch 88.3543% -89 - C7 -4Y96 - ? -
8 PsiBlast_PDB 88.3043% -98 - C7 -4GNJ - ? -
143 HHSearch 86.8841% -90 - C7 -4MKN 2.8 ?
30 PsiBlast_CBE 86.7443%-104 - C7 -4GNJ - ? -
142 HHSearch 86.6842% -91 - C7 -4Y8F - TPIS_CLOPE -
4 PsiBlast_PDB 86.6845% -93 - C7 -4WJE - ? -
1 PsiBlast_PDB 86.3245% -91 - C7 -3QST - ? -
48 PsiBlast_CBE 86.1341% -84 - C7 -4MKN 2.8 ?
136 HHSearch 85.9440% -98 - C7 -1B9B - -
29 PsiBlast_CBE 85.9443% -98 - C7 -5CG7 - ? -
152 Fugue 85.5942% -95 - C7 -1TCD - TPIS_TRYCR -
153 Fugue 85.3442% -91 - C7 -1IF2 4.3 TPIS_LEIME
16 PsiBlast_PDB 85.2344% -85 - C7 -2BTM - TPIS_GEOSE -
38 PsiBlast_CBE 85.1542%-105 - C7 -4HHP 3.2 ?
41 PsiBlast_CBE 84.6841%-101 - C7 -1SUX - TPIS_TRYCR -
46 PsiBlast_CBE 84.6343%-122 - C7 -4G1K - ? -
43 PsiBlast_CBE 84.5341%-103 - C7 -1CI1 - TPIS_TRYCR -
37 PsiBlast_CBE 84.4742%-105 - C7 -4HHP - ? -
132 HHSearch 84.4439% -99 - C7 -1TRE - TPIS_ECOLI -
32 PsiBlast_CBE 84.1444% -81 - C7 -2BTM 3.1 TPIS_GEOSE
59 PsiBlast_CBE 83.3038% -91 - C7 -4MVA 3.7 ?
150 HHSearch 83.2538%-105 - C7 -4MVA 3.7 ?
95 PsiBlast_CBE 83.2339% -77 - C7 -1LZO 1.8 TPIS_PLAFA
127 PsiBlast_CBE 83.1839% -74 - C7 -5BMX 2.5 TPIS_PLAFA
117 PsiBlast_CBE 82.9639% -78 - C7 -2VFH 3.0 TPIS_PLAFA
144 HHSearch 82.9141% -89 - C7 -4Z0J 2.7 TPIS_PLAFA
130 PsiBlast_CBE 82.9139% -75 - C7 -5BMW 2.7 TPIS_PLAFA
115 PsiBlast_CBE 82.4139% -76 - C7 -4ZZ9 2.5 TPIS_PLAFA
58 PsiBlast_CBE 82.0238% -94 - C7 -4MVA 2.0 ?
122 PsiBlast_CBE 81.9839% -74 - C7 -3PSW 2.4 TPIS_PLAFA
79 PsiBlast_CBE 81.9539% -79 - C7 -4Z0S 2.7 TPIS_PLAFA
129 PsiBlast_CBE 81.9139% -75 * C7 *5BMW 2.7 TPIS_PLAFA
35 PsiBlast_CBE 81.7943% -80 - C7 -1BTM 3.1 TPIS_GEOSE
92 PsiBlast_CBE 81.7539% -76 - C7 -1M7P 2.1 TPIS_PLAFA
126 PsiBlast_CBE 81.6839% -76 - C7 -5BMX 2.6 TPIS_PLAFA
128 PsiBlast_CBE 81.6639% -74 - C7 -5BMX 2.5 TPIS_PLAFA
112 PsiBlast_CBE 81.5939% -81 - C7 -3PSV 2.6 TPIS_PLAFA
87 PsiBlast_CBE 81.4439% -72 - C7 -2VFI 3.3 TPIS_PLAFA
70 PsiBlast_CBE 81.4340% -73 - C7 -2VFE 2.5 TPIS_PLAFA
118 PsiBlast_CBE 81.3239% -71 - C7 -2VFH 3.5 TPIS_PLAFA
90 PsiBlast_CBE 81.2939% -73 - C7 -1O5X 3.2 TPIS_PLAFA
97 PsiBlast_CBE 81.2539% -71 - C7 -1LYX 3.1 TPIS_PLAFA
91 PsiBlast_CBE 81.2339% -76 - C7 -1M7P 2.7 TPIS_PLAFA
94 PsiBlast_CBE 81.1939% -73 - C7 -1M7O 3.6 TPIS_PLAFA
93 PsiBlast_CBE 81.1839% -74 - C7 -1M7O 3.8 TPIS_PLAFA
69 PsiBlast_CBE 80.8740% -86 - C7 -2VFE 2.2 TPIS_PLAFA
96 PsiBlast_CBE 80.7439% -78 - C7 -1LZO 1.8 TPIS_PLAFA
86 PsiBlast_CBE 80.6339% -87 - C7 -4YXG 3.0 TPIS_PLAFA
116 PsiBlast_CBE 80.2539% -77 - C7 -4ZZ9 2.5 TPIS_PLAFA
67 PsiBlast_CBE 80.1940% -77 - C7 -4YWI 2.4 TPIS_PLAFA
88 PsiBlast_CBE 79.8339% -71 - C7 -2VFI 3.3 TPIS_PLAFA
121 PsiBlast_CBE 79.7739% -85 - C7 -3PSW 2.3 TPIS_PLAFA
109 PsiBlast_CBE 79.5637% -66 - C7 -3UWV 2.7 TPIS_STAAR
107 PsiBlast_CBE 79.0037% -64 - C7 -3UWW 3.8 TPIS_STAAR
89 PsiBlast_CBE 78.8439% -88 - C7 -1O5X 2.6 TPIS_PLAFA
108 PsiBlast_CBE 78.7737% -64 - C7 -3UWV 3.2 TPIS_STAAR
140 HHSearch 78.6637% -89 - C7 -3YPI 3.4 TPIS_YEAST
110 PsiBlast_CBE 78.6537% -64 - C7 -3UWU 4.2 TPIS_STAAR
105 PsiBlast_CBE 78.4737% -64 - C7 -3UWZ 2.2 TPIS_STAAR
106 PsiBlast_CBE 78.3737% -62 - C7 -3UWW 3.3 TPIS_STAAR
111 PsiBlast_CBE 78.3337% -62 - C7 -3UWU 4.3 TPIS_STAAR
24 PsiBlast_CBE 77.9946% -12 - C7 -2I9E 3.0 ?
125 PsiBlast_CBE 77.7339% -82 - C7 -5BMX 2.5 TPIS_PLAFA
104 PsiBlast_CBE 76.8937% -67 - C7 -3UWZ 2.1 TPIS_STAAR
22 PsiBlast_CBE 76.4946% -12 - C7 -2I9E 2.9 ?
103 PsiBlast_CBE 76.4740% -22 - C7 -1SW3 3.3 TPIS_CHICK
102 PsiBlast_CBE 75.3940% -22 - C7 -1SW3 3.9 TPIS_CHICK
101 PsiBlast_CBE 74.8840% -23 - C7 -1TPW 4.6 TPIS_CHICK
100 PsiBlast_CBE 74.3840% -20 - C7 -1TPW 4.0 TPIS_CHICK
75 PsiBlast_CBE 74.3440% -31 - C7 -5EYW 3.6 ?
50 PsiBlast_CBE 74.3040% -3 - C7 -4OWG 3.2 TPIS_RABIT
123 PsiBlast_CBE 74.2640% -17 - C7 -1TPU 3.6 TPIS_CHICK
124 PsiBlast_CBE 74.1240% -17 - C7 -1TPU 3.7 TPIS_CHICK
49 PsiBlast_CBE 74.0240% -7 - C7 -4OWG 3.2 TPIS_RABIT
74 PsiBlast_CBE 73.4440% -31 - C7 -5EYW 3.6 ?
78 PsiBlast_CBE 70.3540% 3 - C7 -1HTI 3.8 TPIS_HUMAN