@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLV3: (2017-11-04 )
MAFILGITGGIGSGKSAATQWFESQGIQVVDADIVAREVVEKGQPALQKIQQTFGDWVLQPDGSLDRRALREYIFQNPQARHTLEQIAHPAIRQSIIQQLQNPKSPYVILVSPLLFETNQHELVNHTLLIDASEQTQIQRASQRDGQNQEQIQKIIAAQMPRERKRELANDIVFNDGLLEHLYQQLEPLHQSYLKRAN

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BA3_B_7(1VHT)
COAE_ECOLI
[Raw transfer]




ADP_A_6(1VHL)
COAE_ECOLI
[Raw transfer]




BA3_A_6(1VHT)
COAE_ECOLI
[Raw transfer]




ADP_B_4(4I1V)
?
[Raw transfer]




ATP_A_4(1JJV)
COAE_HAEIN
[Raw transfer]




UNL_A_3(2F6R)

[Raw transfer]




BU2_A_2(4TTR)
COAE_LEGPH
[Raw transfer]




BU2_A_2(4TTR)
COAE_LEGPH
[Raw transfer]




MPD_B_4(3CH4)
PMVK_HUMAN
[Raw transfer]




65 Fugue 96.5043%-136 - C2 -1JJV 6.7 COAE_HAEIN
24 PsiBlast_CBE 96.4743%-135 - C2 -1VHT 9.7 COAE_ECOLI
3 PsiBlast_PDB 96.1543%-134 - C2 -1VIY - COAE_ECOLI -
2 PsiBlast_PDB 93.8843%-136 - C2 -1VHT 9.1 COAE_ECOLI
1 PsiBlast_PDB 93.8743%-134 - C2 -1VHL 7.1 COAE_ECOLI
77 HHSearch 93.2843%-134 - C2 -1VHT - COAE_ECOLI -
75 HHSearch 92.8943%-126 - C2 -1T3H - COAE_ECOLI -
4 PsiBlast_PDB 91.5143%-130 - C2 -1T3H - COAE_ECOLI -
10 PsiBlast_PDB 89.1137%-138 - C2 -4TTR 2.3 COAE_LEGPH
76 HHSearch 88.6437%-138 - C2 -4TTR 2.3 COAE_LEGPH
9 PsiBlast_PDB 88.5337%-137 - C2 -4TTQ - COAE_LEGPH -
82 HHSearch 87.5339% -76 * C2 *4I1V - ? -
7 PsiBlast_PDB 87.0139% -76 - C2 -4I1V - ? -
83 HHSearch 86.7339% -73 - C2 -4I1U - ? -
28 PsiBlast_CBE 86.6539% -73 - C2 -4I1U - ? -
23 PsiBlast_CBE 86.4843%-127 - C2 -1VHT - COAE_ECOLI -
6 PsiBlast_PDB 86.3739% -75 - C2 -4I1U - ? -
8 PsiBlast_PDB 86.0837%-130 - C- -4TTP - COAE_LEGPH -
27 PsiBlast_CBE 85.9239% -74 - C2 -4I1V 7.2 ?
5 PsiBlast_PDB 82.0343%-117 - C2 -1N3B - COAE_ECOLI -