@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLX5: (2017-11-05 )
MATLNPRDVVIVDGVRSAMGKSKNGMFRNVRADSLSAELVRALVARNQFDVNEVEDLIWGCVNQTLEQGMNIGRNIGLLAGLPKTVAGQTVNRLCGSSMQAIHTAAAQIATNQGDIFIIGGVEHMGHVGMMHGIDLNPEASKHYAKASNMMGLTAEMLGRMNGITREEQDAFGVESHRRAWAATQEGRFKNEIIGVEGHDANGFKILCDIDEVIRPDANLEAFKALKPVFDPKGGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAVIRSMAVAGCDAAIMGYGPVPATQKALKRAGLSIADIQTVELNEAFAAQGLSVLKGLGLYDKQDIVNLNGGAIALGHPLGCSGARITTTLLNVMEQQDTQIGLATMCIGLGQGIATVIERV

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_3(4XL3)
?
[Raw transfer]



PEG_B_8(4WYR)
THLA_CLOAB
[Raw transfer]



GOL_B_14(4XL2)
THLA_CLOAB
[Raw transfer]



COA_B_13(4UBV)
FADA5_MYCTU
[Raw transfer]



PEG_A_5(4WYR)
THLA_CLOAB
[Raw transfer]



GOL_A_8(4XL2)
THLA_CLOAB
[Raw transfer]



GOL_B_7(4XL3)
?
[Raw transfer]



DMS_A_14(4UBW)
FADA5_MYCTU
[Raw transfer]
24 PsiBlast_CBE 81.9666% -26 - C3 -1WDK - FADA_PSEFR -
23 PsiBlast_CBE 81.8466% -27 - C3 -1WDL - FADA_PSEFR -
140 HHSearch 81.7863% -32 - C3 -3GOA - FADA_SALTY -
1 PsiBlast_PDB 81.6166% -28 - C3 -1WDK - FADA_PSEFR -
4 PsiBlast_PDB 81.6066% -25 - C3 -2D3T - FADA_PSEFR -
139 HHSearch 81.5463% -35 - C3 -3GOA - FADA_SALTY -
21 PsiBlast_CBE 81.3566% -23 - C3 -2D3T - FADA_PSEFR -
2 PsiBlast_PDB 81.3566% -27 - C3 -1WDL - FADA_PSEFR -
22 PsiBlast_CBE 81.3466% -25 - C3 -1WDM - FADA_PSEFR -
126 HHSearch 80.3666% -7 - C3 -1WDK - FADA_PSEFR -
3 PsiBlast_PDB 80.0466% -25 - C3 -1WDM - FADA_PSEFR -
127 HHSearch 79.2266% -10 - C3 -1WDM - FADA_PSEFR -
5 PsiBlast_PDB 79.2060% -36 - C3 -3GOA - FADA_SALTY -
6 PsiBlast_PDB 73.6547% -17 - C3 -1ULQ - ? -
43 PsiBlast_CBE 73.2542% -35 - C3 -5F0V - ATOB_ECOLI -
8 PsiBlast_PDB 72.6142% -34 - C3 -4WYS - ATOB_ECOLI -
9 PsiBlast_PDB 72.5642% -34 - C3 -5F0V - ATOB_ECOLI -
138 HHSearch 72.5549% -16 - C3 -1ULQ - ? -
63 PsiBlast_CBE 72.1842% -32 - C3 -5F38 - ? -
42 PsiBlast_CBE 72.0942% -33 - C3 -5F0V - ATOB_ECOLI -
68 PsiBlast_CBE 70.2039% -17 - C3 -4XL2 2.5 THLA_CLOAB
76 PsiBlast_CBE 70.0538% -11 - C3 -4XL3 3.1 ?
67 PsiBlast_CBE 69.7039% -18 - C3 -4XL2 2.4 THLA_CLOAB
77 PsiBlast_CBE 69.3538% -10 - C3 -4XL3 2.2 ?
101 PsiBlast_CBE 63.9940% -6 - C3 -4UBW 3.1 FADA5_MYCTU