@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VLZ5: (2017-11-05 )
MKDLLDIMRKKTDSDGHAPVEFDRIRIGLASPEMIKSWSHGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRMKYKGVICEKCGVEVTTAKVRRERMGHIELASPVAHIWFLKSLPSRIGLLLDMTLRDIERVLYFESYVVTDPGMTPFEKYQLLNDEEYFTALEEHGDEFVAKMGAEAVQDLLKDIDLEAEISRLREEIPQTTSETKLKKASKRLKLMEAFKDSNNKPEWMVMNVLPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPTLRLHQCGLPKKMALELFKPFIFAKLQASGQATTIKAAKKMVERETPEVWDVLASVIRQHPVMLNRAPTLHRLGLQAFEPILIEGKAIRLHPLVCAAFNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYITRDAVNAKGEGMVFADTHEVNRALATGQVAIHARVKVRVHQTVINENGEREQQTIIVDTTPGRCLLWEVVPEGLSFDMINLEMTKKNISKLINSCYRKLGLKDTVIFADQLMYLGFRQATRSGVSVGMEDMLIPPTKHTIIDKAETEVREIEQQFEQGFVTAGERYNKVVDIWARTNDQVAKAMMDNLSYTLVKNKQGEDEKQKSFNSIYMMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVITEPDCGTRGGLVMTPFIQGGDVIEPLRDRVLGRVTAEDVRRASDDEVVLPRGTLIDEKIAAQLEEAGVDEVKVRSVIACESTFGVCAKCYGRDLARGHLVNPGESVGVMAAQSIGEPGTQLTMRTFHVGGAASRTSAANSVQVRNKGTVRFHNVKTVQHAKGHLVSVSRSGEIGIADELGRERERYKLPYGASILLKDGELVEAGGIVATWDPHTHPLVTEVAGKARFSQIADGVTATSKTDDATGMTTVEILPVTARPASGKDLRPAIVLDTTDGGEQFYFLPQNTIVTVRDGETIGVGDVIGRVPQESSRTRDITGGLPRVADLFEARKPKEHAILAEVSGIVSFGKETKGKNRLVITPDDGSEIYEELIPKWRQINVFEGEHVNRGETISDGPQNPHDILRLKGEVALTNYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKVDIIDGGDTSFIKGEQVDYIRVVQENQAVLAQNKFPAKFERQLMGITKASLSTDSFISAASFQETTRVLTEAAVTGKEDDLRGLKENVVVGRLIPAGTGLAYHLERRRQEAEAAEHALHNDFSEVDQAFSQALNSEQF

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_M_13(4S20)
?
[Raw transfer]
-
NACID_O_15(4S20)
?
[Raw transfer]
-
NACID_I_9(5X22)
?
[Raw transfer]
-
NACID_U_21(3AOI)
RPOC_THET8
[Raw transfer]
-
NACID_I_9(5X21)
?
[Raw transfer]
-
NACID_S_18(5X22)
?
[Raw transfer]
-
NACID_Q_16(4G7O)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(4G7O)
RPOC_THET8
[Raw transfer]
-
NACID_Q_15(4XLN)
?
[Raw transfer]
-
NACID_T_18(4XLN)
?
[Raw transfer]
-
NACID_G_7(4OIP)
RPOC_THET8
[Raw transfer]
-
NACID_S_19(3AOI)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(5E17)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(5VO8)
?
[Raw transfer]
-
NACID_K_11(5I2D)
RPOC_THET8
[Raw transfer]
-
NACID_V_22(5I2D)
RPOC_THET8
[Raw transfer]
-
NACID_G_1(2O5I)
RPOC_THET8
[Raw transfer]
-
NACID_Q_17(3AOI)
RPOC_THET8
[Raw transfer]
-
NACID_Y_15(4WQS)
RPOC_THET8
[Raw transfer]
-
NACID_G_14(4G7Z)
RPOC_THET8
[Raw transfer]
-
NACID_G_8(5UH6)
RPOC_MYCTU
[Raw transfer]
-
NACID_X_4(2O5I)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(4OIR)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(5D4C)
RPOC_THET8
[Raw transfer]
-
NACID_G_8(5UHC)
RPOC_MYCTU
[Raw transfer]
-
NACID_G_7(4G7H)
RPOC_THET8
[Raw transfer]
-
NACID_Q_15(4G7H)
RPOC_THET8
[Raw transfer]
-
NACID_R_15(5D4E)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(4OIN)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(5E18)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(4OIQ)
RPOC_THET8
[Raw transfer]
-
NACID_G_8(5UHD)
RPOC_MYCTU
[Raw transfer]
-
NACID_Q_16(4G7Z)
RPOC_THET8
[Raw transfer]
-
NACID_T_20(4XLR)
RPOC_THEAQ
[Raw transfer]
-
NACID_R_15(5D4C)
RPOC_THET8
[Raw transfer]
-
NACID_G_8(5UH6)
RPOC_MYCTU
[Raw transfer]
-
NACID_G_8(5UH5)
RPOC_MYCTU
[Raw transfer]
-
NACID_G_8(5D4E)
RPOC_THET8
[Raw transfer]
-
NACID_G_7(4OIO)
RPOC_THET8
[Raw transfer]
-
NACID_G_8(5UHA)
RPOC_MYCTU
[Raw transfer]
-
NACID_G_8(5UHG)
RPOC_MYCTU
[Raw transfer]
-
NACID_Q_17(4XLR)
RPOC_THEAQ
[Raw transfer]
-
NACID_G_8(5UHF)
RPOC_MYCTU
[Raw transfer]
-
NACID_G_8(5UHE)
RPOC_MYCTU
[Raw transfer]
-
NACID_G_7(4Q5S)
RPOC_THET8
[Raw transfer]
-
NACID_G_8(5UH8)
RPOC_MYCTU
[Raw transfer]
-
NACID_G_8(5UH9)
RPOC_MYCTU
[Raw transfer]
-
NACID_G_8(5UHB)
RPOC_MYCTU
[Raw transfer]
-
43 PsiBlast_CBE 98.1770% 0 - C- -4YLN - RPOC_ECOLI -
41 PsiBlast_CBE 98.1770% 0 - C- -4YLO - RPOC_ECOLI -
39 PsiBlast_CBE 98.1770% 0 - C- -4YLP - RPOC_ECOLI -
14 PsiBlast_PDB 98.1770% 0 - C- -4YLP - RPOC_ECOLI -
13 PsiBlast_PDB 98.1770% 0 - C- -4YLO - RPOC_ECOLI -
12 PsiBlast_PDB 98.1770% 0 - C- -4YLN - RPOC_ECOLI -
138 Fugue 81.9951% 0 - C- -1IW7 - RPOC_THET8 -
19 PsiBlast_PDB 74.3070% -51 - C3 -5IPN - RPOC_ECOLI -
18 PsiBlast_PDB 74.2770% -50 - C3 -5IPM - RPOC_ECOLI -
1 PsiBlast_PDB 73.5770% -54 - C3 -4JKR - ? -
22 PsiBlast_CBE 73.3270% -51 - C3 -4JKR - ? -
15 PsiBlast_PDB 72.6270% -40 - C3 -5BYH - RPOC_ECOLI -
4 PsiBlast_PDB 70.9670% -42 - C3 -3IYD - RPOC_ECOLI -
17 PsiBlast_PDB 70.6070% -76 - C3 -5IPL - RPOC_ECOLI -
5 PsiBlast_PDB 69.5670% -38 - C3 -3LU0 - RPOC_ECOLI -
28 PsiBlast_CBE 69.4670% -79 - C3 -5VSW - ? -
46 PsiBlast_CBE 68.9570% -80 - C3 -4YFN - RPOC_ECO24 -
11 PsiBlast_PDB 68.8570% -79 - C3 -4MEX - RPOC_ECOLI -
27 PsiBlast_CBE 68.8170% -76 - C3 -5VSW - ? -
3 PsiBlast_PDB 68.7670% -37 - C3 -5MS0 - ? -
21 PsiBlast_CBE 68.1270% -75 - C3 -4S20 Error ?
2 PsiBlast_PDB 68.0170% -76 - C3 -4S20 Error ?
151 HHSearch 59.3352% 23 - C3 -5UH6 Error RPOC_MYCTU
87 PsiBlast_CBE 58.4748% 7 - C3 -4OIN 5.1 RPOC_THET8
85 PsiBlast_CBE 58.2748% 9 - C3 -4OIP 6.0 RPOC_THET8
78 PsiBlast_CBE 58.1648% 12 - C3 -5D4C 5.5 RPOC_THET8
72 PsiBlast_CBE 58.1648% 8 - C3 -5I2D 3.3 RPOC_THET8
92 PsiBlast_CBE 58.0448% 10 - C3 -4G7O 4.3 RPOC_THET8
64 PsiBlast_CBE 57.9348% 7 - C3 -5X22 3.0 ?
95 PsiBlast_CBE 57.9148% 9 - C3 -4G7H 5.2 RPOC_THET8
75 PsiBlast_CBE 57.7948% 10 - C3 -5D4E 5.6 RPOC_THET8
93 PsiBlast_CBE 57.7848% 9 - C3 -4G7O 4.9 RPOC_THET8
83 PsiBlast_CBE 57.7548% 13 - C3 -4OIR 5.2 RPOC_THET8
66 PsiBlast_CBE 57.6848% 9 - C3 -5X21 2.7 ?
90 PsiBlast_CBE 57.6548% 11 - C3 -4G7Z 5.3 RPOC_THET8
68 PsiBlast_CBE 57.6448% 12 - C3 -5VO8 5.6 ?
74 PsiBlast_CBE 57.6348% 11 - C3 -5E17 3.5 RPOC_THET8
77 PsiBlast_CBE 57.5848% 10 - C3 -5D4C 5.5 RPOC_THET8
73 PsiBlast_CBE 57.5848% 10 - C3 -5E18 3.6 RPOC_THET8
76 PsiBlast_CBE 57.5348% 9 - C3 -5D4E 4.8 RPOC_THET8
94 PsiBlast_CBE 57.4848% 12 - C3 -4G7H 5.1 RPOC_THET8
71 PsiBlast_CBE 57.3348% 11 - C3 -5I2D 2.8 RPOC_THET8
54 PsiBlast_CBE 57.2748% 16 - C3 -5UHF 3.6 RPOC_MYCTU
137 PsiBlast_CBE 57.2648% 16 - C3 -4XLN 3.7 ?
60 PsiBlast_CBE 57.1248% 17 - C3 -5UH9 5.0 RPOC_MYCTU
86 PsiBlast_CBE 57.0848% 5 - C3 -4OIO 5.9 RPOC_THET8
53 PsiBlast_CBE 57.0448% 17 - C3 -5UHG 2.9 RPOC_MYCTU
55 PsiBlast_CBE 56.9448% 16 - C3 -5UHE 3.2 RPOC_MYCTU
84 PsiBlast_CBE 56.9048% 10 - C3 -4OIQ 5.3 RPOC_THET8
136 PsiBlast_CBE 56.7948% 16 - C3 -4XLN 2.3 ?
56 PsiBlast_CBE 56.7048% 19 - C3 -5UHD 3.6 RPOC_MYCTU
82 PsiBlast_CBE 56.6448% 11 - C3 -4Q5S 6.8 RPOC_THET8
63 PsiBlast_CBE 56.6348% 18 - C3 -5UH5 5.0 RPOC_MYCTU
58 PsiBlast_CBE 56.5448% 17 - C3 -5UHB 5.1 RPOC_MYCTU
59 PsiBlast_CBE 56.2948% 20 - C3 -5UHA 4.6 RPOC_MYCTU
91 PsiBlast_CBE 56.2448% 11 - C3 -4G7Z 4.9 RPOC_THET8
57 PsiBlast_CBE 56.2348% 18 - C3 -5UHC 4.0 RPOC_MYCTU
61 PsiBlast_CBE 56.0248% 19 - C3 -5UH8 5.9 RPOC_MYCTU
62 PsiBlast_CBE 55.9448% 18 - C3 -5UH6 4.0 RPOC_MYCTU
130 PsiBlast_CBE 55.5248% 14 - C3 -4XLR 3.5 RPOC_THEAQ
131 PsiBlast_CBE 55.3348% 14 - C3 -4XLR 4.1 RPOC_THEAQ
108 PsiBlast_CBE 55.2948% 10 - C3 -2O5I 5.0 RPOC_THET8
101 PsiBlast_CBE 55.0948% 13 - C3 -3AOI 2.4 RPOC_THET8
102 PsiBlast_CBE 55.0148% 13 - C3 -3AOI 2.2 RPOC_THET8
107 PsiBlast_CBE 54.8948% 12 - C3 -2O5I 4.9 RPOC_THET8
103 PsiBlast_CBE 54.8648% 13 - C3 -3AOI 2.5 RPOC_THET8
65 PsiBlast_CBE 53.9348% -2 - C3 -5X22 2.9 ?
81 PsiBlast_CBE 50.3648% 11 - C3 -4WQS 2.6 RPOC_THET8