@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VM14: (2017-11-05 )
MDMIFGKLGWDSIPTEPIVLVTMVFMALGAIAVLGGITYFKKWGYLWKEWFTTVDHKKIGIMYIIVSVVMLLRGFADAIMMRLQLFLAKGGGEGYLHPDHYDQIFTAHGVIMIFFVAMGLVVGMMNISVPLQIGARDVAFPLLNSLSFWLFAGAAGLMMLSLVLGEFAATGWMAYPPLSGIQYSPGVGVDYYIWALQVSGLGTLLSGVNFFVTIIKMRAPGMKLMDMPIFTWTSLCTAVLIIASFPVLTGTLAMLTLDRYFGFHFFTNELGGSPMLYVNLIWTWGHPEVYILVLPAFGLYSEIVATFSRKALFGYKSMVYATIAITVLAFVVWLHHFFTMGAGANVNAFFGIMTMVIAIPTGVKIFSWLFTMYKGRITFTTPMLWTLGFLVTFGIGGLTGVLMAVPPADFLVHNSLFLIAHFHNVIIGGVVFGMFAGIIYYWPKMFGWKLNEAWGKAAFWFWFFGFYFAFMPLYILGFMGMTRRLNTYDNPEWDPYLAIALFGAVLVAIGIACFLMQIIVGFLQRHQNMDYTGDPWDARTLEWATSSPAPFYNFAHEPDASGIDRFWTDKENGVAYARNTKYEDIHMPTDRAAGFVIAMFITLLGFALIWHIWWLVVVSFVAAVVSLIVSSFTKNVDYYVPAAEVERIENERYALLEKHLKKD

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEA_A_6(3HB3)
COX1B_PARDE
[Raw transfer]



HEA_A_11(1AR1)
COX1B_PARDE
[Raw transfer]



CMO_A_8(3QJT)
COX1_THET8
[Raw transfer]



PEO_A_22(3HB3)
COX1B_PARDE
[Raw transfer]



LDA_A_14(1AR1)
COX1B_PARDE
[Raw transfer]
83 HHSearch 84.7167%-168 - C1 -1FFT - CYOB_ECOLI -
21 PsiBlast_CBE 84.5066%-168 - C1 -1FFT - CYOB_ECOLI -
1 PsiBlast_PDB 84.4166%-168 - C1 -1FFT - CYOB_ECOLI -
84 HHSearch 77.1135%-158 - C1 -2YEV - COX13_THET8 -
86 HHSearch 74.6041%-156 - C1 -3OMA - ? -
12 PsiBlast_PDB 73.7937%-152 - C1 -2YEV - COX13_THET8 -
28 PsiBlast_CBE 73.5137%-153 - C1 -2YEV - COX13_THET8 -
15 PsiBlast_PDB 72.8338%-152 - C1 -3OMI - ? -
14 PsiBlast_PDB 72.7538%-151 - C1 -3OMA - ? -
8 PsiBlast_PDB 72.5038%-152 - C1 -3DTU - COX1_RHOSH -
85 HHSearch 72.3440% 0 - C- -2GSM - COX1_RHOSH -
29 PsiBlast_CBE 72.1838%-150 - C1 -3OMA - ? -
24 PsiBlast_CBE 72.1238%-151 - C1 -3DTU - COX1_RHOSH -
16 PsiBlast_PDB 72.1038%-150 - C1 -3OMN - ? -
13 PsiBlast_PDB 71.9638%-151 - C1 -3OM3 - ? -
10 PsiBlast_PDB 71.9538%-147 - C1 -3FYI - COX1_RHOSH -
22 PsiBlast_CBE 71.9138%-148 - C1 -3FYI - COX1_RHOSH -
32 PsiBlast_CBE 71.8938%-152 - C1 -3OMI - ? -
9 PsiBlast_PDB 71.6838%-148 - C1 -3FYE - COX1_RHOSH -
6 PsiBlast_PDB 71.6638% 0 - C- -1M56 - COX1_RHOSH -
3 PsiBlast_PDB 71.5738%-146 - C1 -3HB3 12.2 COX1B_PARDE
103 Fugue 71.3039%-130 - C1 -1AR1 2.3 COX1B_PARDE