@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VM29: (2017-11-05 )
MKIQGKHFVITGGGSGLGAATAEYLVKQGASVTLVDMNVEAGEQQAKHLGPKAGFVKLDVTDEATAEQFFKDVLVKHGHLHGLVNCAGIGPSAKVVGREGVHDLGLFAKTLNINVTGTFNMLRFAADAMSKNTVEEGEEDRGIIVNTASVAAFDGQIGQAAYSASKGAIVAMTLPIARELARHAIRIMTIAPGIMETPMLKGMPQNVQDALGQMVPYPSRLGKPEEFARLVAHIAENSYLNGEVIRLDGAIRMAAK

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TDT_H_8(1U7T)
HCD2_HUMAN
[Raw transfer]




NAD_D_8(1E6W)
HCD2_RAT
[Raw transfer]




NAD_C_7(1E3W)
HCD2_RAT
[Raw transfer]




NAD_D_8(1E3W)
HCD2_RAT
[Raw transfer]




NAD_A_3(2O23)
HCD2_HUMAN
[Raw transfer]




TDT_G_7(1U7T)
HCD2_HUMAN
[Raw transfer]




NAD_A_5(1E3W)
HCD2_RAT
[Raw transfer]




TDT_E_5(1U7T)
HCD2_HUMAN
[Raw transfer]




NAD_C_7(1E6W)
HCD2_RAT
[Raw transfer]




NAD_B_6(1E3W)
HCD2_RAT
[Raw transfer]




NAD_A_5(1E6W)
HCD2_RAT
[Raw transfer]




NAD_F_6(1U7T)
HCD2_HUMAN
[Raw transfer]




NAD_A_5(1E3S)
HCD2_RAT
[Raw transfer]




NAD_D_8(1E3S)
HCD2_RAT
[Raw transfer]




NAD_B_6(1E6W)
HCD2_RAT
[Raw transfer]




NAD_C_7(1E3S)
HCD2_RAT
[Raw transfer]




NAD_B_6(1E3S)
HCD2_RAT
[Raw transfer]




NAI_B_6(5ITV)
BACC_BACSU
[Raw transfer]




NAI_C_7(5ITV)
BACC_BACSU
[Raw transfer]




ADN_A_3(1UAY)
?
[Raw transfer]




ADN_B_4(1UAY)
?
[Raw transfer]




EDO_B_14(5HA5)
?
[Raw transfer]




EST_L_9(1E6W)
HCD2_RAT
[Raw transfer]




EDO_B_5(4O5O)
?
[Raw transfer]




35 PsiBlast_CBE 93.6561%-107 - C1 -4XGN - ? -
32 PsiBlast_CBE 93.6161%-108 - C1 -4XGN - ? -
28 PsiBlast_CBE 93.3160% -99 - C1 -4PN3 - ? -
34 PsiBlast_CBE 92.9661%-107 - C1 -4XGN - ? -
27 PsiBlast_CBE 92.4460%-100 - C1 -4PN3 - ? -
33 PsiBlast_CBE 91.8461%-109 - C1 -4XGN - ? -
23 PsiBlast_CBE 91.8360%-101 - C1 -4PN3 - ? -
31 PsiBlast_CBE 91.7661%-107 - C1 -4XGN - ? -
25 PsiBlast_CBE 91.7660%-100 - C1 -4PN3 - ? -
117 HHSearch 91.7361%-104 - C1 -4O5O 3.3 ?
3 PsiBlast_PDB 91.6161%-105 - C1 -4XGN - ? -
21 PsiBlast_CBE 91.3061%-102 - C1 -4O5O - ? -
29 PsiBlast_CBE 90.8261%-106 - C1 -4XGN - ? -
24 PsiBlast_CBE 90.4960% -98 - C1 -4PN3 - ? -
2 PsiBlast_PDB 90.1060%-103 - C1 -4PN3 - ? -
1 PsiBlast_PDB 89.0461%-101 - C1 -4O5O - ? -
116 HHSearch 88.9361%-101 - C1 -4O5O - ? -
129 HHSearch 88.4661%-106 - C1 -4XGN - ? -
22 PsiBlast_CBE 87.5360%-103 - C1 -4PN3 - ? -
26 PsiBlast_CBE 85.7960%-102 - C1 -4PN3 - ? -
40 PsiBlast_CBE 78.3150% -54 - C1 -1E6W 11.6 HCD2_RAT
43 PsiBlast_CBE 77.1150% -52 - C1 -1E3W 11.7 HCD2_RAT
6 PsiBlast_PDB 75.5752% -50 - C1 -1U7T 14.3 HCD2_HUMAN
37 PsiBlast_CBE 74.8552% -51 - C1 -1U7T 15.0 HCD2_HUMAN
39 PsiBlast_CBE 74.5352% -52 - C1 -1U7T 10.3 HCD2_HUMAN
41 PsiBlast_CBE 74.4550% -58 - C1 -1E6W 11.6 HCD2_RAT
45 PsiBlast_CBE 74.4150% -58 - C1 -1E3W 10.3 HCD2_RAT
9 PsiBlast_PDB 73.4850% -59 - C1 -1E3W 10.4 HCD2_RAT
38 PsiBlast_CBE 72.9252% -49 - C1 -1U7T 14.6 HCD2_HUMAN
10 PsiBlast_PDB 72.7950% -57 - C1 -1E6W 10.9 HCD2_RAT
47 PsiBlast_CBE 72.6050% -62 - C1 -1E3S 10.3 HCD2_RAT
42 PsiBlast_CBE 72.5050% -64 - C1 -1E6W 11.1 HCD2_RAT
44 PsiBlast_CBE 72.4650% -58 - C1 -1E3W 11.3 HCD2_RAT
11 PsiBlast_PDB 72.4350% -60 - C1 -1E3S 9.9 HCD2_RAT
48 PsiBlast_CBE 71.1050% -59 - C1 -1E3S 10.6 HCD2_RAT
8 PsiBlast_PDB 71.0152% -56 - C1 -2O23 10.2 HCD2_HUMAN
46 PsiBlast_CBE 70.5150% -60 - C1 -1E3S 10.7 HCD2_RAT