@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VM31: (2017-11-05 )
MKTLAEAYRQFDLTRLIEEQLVGHPQAINAYVECCERYVGKNKTALIWEGKNGQAEYYTFEQLAELSGKLANFFKAQGIQAGDCIAGLLPRTPELLITILAAWRIGAIYQPLFTAFEAKSIDHRITTAQTKLIVTNDEQRPKLNSLNVPVIVTVHQTGLLSEHDFDFWQSLQRYSEQCEPVNRSVDDDFLMMFTSGTTGLAKSVPVPLKAILAFKGYMTHAVDLREEDMFWNLADPGWAYGLYYGITGPLSLGHSIIMDERSFNVDQAMELIKKYKVSNLTGSPTAFRMFFGFKEKFDPSIKQHLRVVSSAGEPLTPEVVNWFKQDLEVNIFDQYGQTELGMVIANHHALEHPLKVGSAGFAIPGHRFAVLDQNYQELPTGGVGILAMDSEQSPLMWFKGYGGNNRKSFVGKYYLTGDTVTLNEHGGIGFVGRADDVITTSGYRVGPFDVESTLLECEAVLESAVIGKPDPERTEIVKAFVVLKPAYQACETLKDKLQQYVRNRLSRHAYPKEIEFVDSLPKTTSGKIQRGLLKQQEIAKMQPYAS

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_7(3C5E)
ACS2A_HUMAN
[Raw transfer]



ATP_A_7(3C5E)
ACS2A_HUMAN
[Raw transfer]



APC_A_7(3DAY)
ACS2A_HUMAN
[Raw transfer]



COA_A_4(3GPC)
ACS2A_HUMAN
[Raw transfer]



AMP_A_3(3EQ6)
ACS2A_HUMAN
[Raw transfer]



AMP_B_5(3EQ6)
ACS2A_HUMAN
[Raw transfer]



PRX_C_3(2P2M)
ACSA_SALTY
[Raw transfer]



COA_B_6(3GPC)
ACS2A_HUMAN
[Raw transfer]



GOL_B_23(3ETC)
?
[Raw transfer]



GOL_A_12(3ETC)
?
[Raw transfer]
1 PsiBlast_PDB 86.4852% -22 - C1 -5U2A - ? -
27 HHSearch 82.1352% -26 - C1 -5U2A - ? -
10 PsiBlast_PDB 75.4131% 0 - C- -1RY2 - ACS1_YEAST -
31 HHSearch 70.1827% -30 - C1 -2P20 - ACSA_SALTY -
38 HHSearch 69.0131% 3 * C1 *3B7W - ACS2A_HUMAN -
2 PsiBlast_PDB 67.7730% 8 - C1 -3ETC 2.1 ?
14 PsiBlast_PDB 67.5427% -1 - C1 -2P2M 6.8 ACSA_SALTY
4 PsiBlast_PDB 67.1431% -1 - C1 -3B7W - ACS2A_HUMAN -
37 HHSearch 66.9731% 3 - C1 -3C5E 8.4 ACS2A_HUMAN
12 PsiBlast_PDB 66.8027% -1 - C1 -5JRH - ACSA_SALTY -
24 PsiBlast_CBE 66.6831% -1 - C1 -3EQ6 6.0 ACS2A_HUMAN
7 PsiBlast_PDB 66.6531% -0 - C1 -2VZE - ACS2A_HUMAN -
6 PsiBlast_PDB 66.4031% -1 - C1 -3DAY 8.7 ACS2A_HUMAN
28 HHSearch 66.3931% -5 - C1 -3ETC 4.1 ?
25 PsiBlast_CBE 66.3831% -0 - C1 -2VZE - ACS2A_HUMAN -
17 PsiBlast_PDB 66.3727% -2 - C1 -2P20 - ACSA_SALTY -
8 PsiBlast_PDB 66.0731% 0 - C1 -3EQ6 6.3 ACS2A_HUMAN
26 PsiBlast_CBE 66.0431% 0 - C1 -2VZE - ACS2A_HUMAN -
22 PsiBlast_CBE 65.9831% 2 - C1 -2WD9 - ACS2A_HUMAN -
3 PsiBlast_PDB 65.8831% 1 - C1 -2WD9 - ACS2A_HUMAN -
5 PsiBlast_PDB 65.5331% 3 - C1 -3C5E 8.4 ACS2A_HUMAN