@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VM63: (2017-11-06 )
MTDEKLTQRRIHTLDAALANQIAAGEVIERPSSVVKELLENSIDAGATELIVRIAQGGSTLIEIIDNGHGIHPDDLPLAVMRHATSKIKTAEDLHAIVSLGFRGEALASIAAVSRLTLTSSQDESGIGHQVEVNGTAFDHQQVQAVAAQKGTHIRVQDLFFNVPARRKFLKKPTTEFGHIEEIVRRLALTHFDIRFVLEHNDNIRINLPIADSGELRFQRVQQLLGQQFVQNAYWIDAESINMRLSGWLGHPSDARAQADLQYVYVNGRIVKDKTISHALRMAYDGILHGHQHSSYLLFLEVDPENIDVNVHPTKHEIRFLNQREVHEFVRHYAKETLAQFQTASADLAQAMKVDDTQNLSVQPQPKYQEQFTLHRTAQAADTAVDKPNGYQPSTELLTDFNNSRPQSVHYAEQTPKYNGSAQLNNALKTYLAPLRDQPANFSVDESIEPVPKVDEFPLGIAIAQLHGIYILAQNTEGLIIVDMHAAHERILLKQMKNAWDKPEFWTSQQLLIPKVISISRMQAVRVEDLKPQLERLGLEIDLYGDEQVIVRGVPAILQKADFENLIPELLNDLDPNDEAQGLLQKRDELLAGMACHGAVRAHRQLSLSEMNALLRQMEQTEFASQCNHGRPTWRAFPLSQLDKLFARGE

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_9(1NHH)
MUTL_ECOLI
[Raw transfer]



ANP_A_6(1NHI)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]



ANP_A_4(1NHJ)
MUTL_ECOLI
[Raw transfer]



ADP_A_3(1B62)
MUTL_ECOLI
[Raw transfer]
4 PsiBlast_PDB 86.2946% -82 - C2 -1B62 7.6 MUTL_ECOLI
9 PsiBlast_PDB 84.7048% -77 - C2 -1NHJ 10.3 MUTL_ECOLI
8 PsiBlast_PDB 83.7949% -76 - C2 -1NHI 10.2 MUTL_ECOLI
6 PsiBlast_PDB 83.7249% -75 - C2 -1B63 10.3 MUTL_ECOLI
33 HHSearch 79.4348% -25 - C2 -1B63 10.3 MUTL_ECOLI
7 PsiBlast_PDB 79.1749% -77 - C2 -1NHH 10.2 MUTL_ECOLI
2 PsiBlast_PDB 78.9347% -99 - C2 -5AKC - MUTL_ECOLI -
3 PsiBlast_PDB 77.2547%-107 - C2 -5AKD - MUTL_ECOLI -
1 PsiBlast_PDB 75.5747% -96 - C2 -5AKB - MUTL_ECOLI -
24 Fugue 75.2848% 11 - C2 -1B63 10.3 MUTL_ECOLI
5 PsiBlast_PDB 73.0946% -99 - C2 -1BKN - MUTL_ECOLI -
36 HHSearch 64.1126% -29 - C2 -3H4L - PMS1_YEAST -
23 Fugue 62.7452% -83 - C2 -1B63 9.8 MUTL_ECOLI
35 HHSearch 59.8924% -29 - C2 -1H7S - PMS2_HUMAN -
11 PsiBlast_PDB 53.9027% -7 - C2 -3H4L - PMS1_YEAST -
27 Fugue 47.6253% 41 - C2 -1B63 9.8 MUTL_ECOLI
41 HHSearch 47.5619%-145 - C1 -1X9Z - -
12 PsiBlast_PDB 45.0133% -21 - C1 -3GAB - MUTL_BACSU -
29 Fugue 42.0640% -53 - C2 -1B63 Error MUTL_ECOLI
44 HHSearch 41.3329%-130 * C1 *5B42 - -
30 Fugue 38.2438% -40 - C2 -1B63 Error MUTL_ECOLI