@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VMK1: (2017-11-08 )
MRLKIAKESLLNVLSHVVGAVERRHTLNILSNVKIQTNAQALTITGSDLEVELVASTALSEGACLEAGETTVPARKLMEICKSLPTAALIDLQITEDQRCILKSGNSRFVLGTLPAEDYPLLTTENSQGTQVQVTQRELKRLFEKTAFAMAVQDVRFYLTGTLLEIDENQLRAVTTDGHRLALCEILASSTSSQLVQAIVPRKAVGELQRLLSIEDEQLTLLIGRELLNVTINTPSRDKEQGDITVRFTTKLIDGKFPDYRRVIPRGGDKHVLIGHDVFKQSLQRVAILSNEKLRGVFLNFNQDSLQLRANNPEQDEAIEDLAIQYQNAPLEMSFNAQYLLDVLGVLDGDDVNMSMTEANQSVLVQDPAHPDQTYVVMPMRV

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2VF_A_3(4OVG)
?
[Raw transfer]




2VG_A_9(4OVF)
?
[Raw transfer]




2VD_A_7(4PNU)
?
[Raw transfer]




2VG_B_15(4OVF)
?
[Raw transfer]




2VM_A_3(4PNW)
?
[Raw transfer]




0LA_A_6(4MJR)
DPO3B_ECOLI
[Raw transfer]




2VF_B_13(4OVG)
?
[Raw transfer]




2VM_B_7(4PNW)
?
[Raw transfer]




2VD_B_12(4PNU)
?
[Raw transfer]




2VE_A_7(4OVH)
?
[Raw transfer]




27R_A_3(4MJQ)
DPO3B_ECOLI
[Raw transfer]




2J2_A_6(4N9A)
DPO3B_ECOLI
[Raw transfer]




4FC_A_3(4N98)
DPO3B_ECOLI
[Raw transfer]




27O_B_9(4MJP)
DPO3B_ECOLI
[Raw transfer]




SFK_A_9(4K3K)
DPO3B_ECOLI
[Raw transfer]




743_B_4(3QSB)
DPO3B_ECOLI
[Raw transfer]




743_A_3(3QSB)
DPO3B_ECOLI
[Raw transfer]




PHE_B_13(4K3L)
DPO3B_ECOLI
[Raw transfer]




PHE_B_13(4K3L)
DPO3B_ECOLI
[Raw transfer]




PHE_A_4(4K3L)
DPO3B_ECOLI
[Raw transfer]




6NI_A_3(4N96)
DPO3B_ECOLI
[Raw transfer]




322_B_4(3D1G)
DPO3B_ECOLI
[Raw transfer]




2HU_A_3(4N97)
DPO3B_ECOLI
[Raw transfer]




322_A_3(3D1G)
DPO3B_ECOLI
[Raw transfer]




2HO_A_3(4N94)
DPO3B_ECOLI
[Raw transfer]




LEU_B_12(4K3L)
DPO3B_ECOLI
[Raw transfer]




ACE_A_11(4K3L)
DPO3B_ECOLI
[Raw transfer]




ACE_B_26(4K3L)
DPO3B_ECOLI
[Raw transfer]




95 HHSearch 90.3246%-127 - C4 -4K3L 3.0 DPO3B_ECOLI
96 HHSearch 89.4546%-120 - C4 -3BEP - DPO3B_ECOLI -
100 HHSearch 89.3548%-129 - C4 -4TR8 - ? -
1 PsiBlast_PDB 88.1647% 0 - C- -4TSZ - ? -
94 HHSearch 87.8748% 0 - C- -4TSZ - ? -
45 PsiBlast_CBE 87.2445% -48 - C4 -4OVG 3.7 ?
88 PsiBlast_CBE 86.8645% -46 - C4 -3D1G 4.7 DPO3B_ECOLI
50 PsiBlast_CBE 86.6645% -52 - C4 -4N9A 4.6 DPO3B_ECOLI
8 PsiBlast_PDB 86.6545% -45 - C4 -1UNN - DPO3B_ECOLI -
90 PsiBlast_CBE 86.5545% -47 - C4 -3BEP - DPO3B_ECOLI -
15 PsiBlast_PDB 86.5345% -53 - C4 -3Q4K - DPO3B_ECOLI -
16 PsiBlast_PDB 86.5245% -49 - C4 -4K3K 3.9 DPO3B_ECOLI
5 PsiBlast_PDB 86.4445% -51 - C4 -3Q4L - DPO3B_ECOLI -
65 PsiBlast_CBE 86.4045% -51 - C4 -4MJQ 5.2 DPO3B_ECOLI
37 PsiBlast_CBE 86.2645% -50 - C4 -4PNW 5.3 ?
39 PsiBlast_CBE 86.2545% -47 - C4 -4PNV - ? -
80 PsiBlast_CBE 86.2445% -49 - C4 -4K3K - DPO3B_ECOLI -
4 PsiBlast_PDB 86.2245% -49 - C4 -3QSB 5.8 DPO3B_ECOLI
38 PsiBlast_CBE 86.2145% -51 - C4 -4PNW 4.4 ?
14 PsiBlast_PDB 86.1645% -47 - C4 -3Q4J - DPO3B_ECOLI -
55 PsiBlast_CBE 85.9945% -51 - C4 -4N97 4.0 DPO3B_ECOLI
44 PsiBlast_CBE 85.8945% -52 - C4 -4OVH 5.6 ?
46 PsiBlast_CBE 85.6845% -49 - C4 -4OVG 5.2 ?
48 PsiBlast_CBE 85.6045% -50 - C4 -4OVF 5.1 ?
53 PsiBlast_CBE 85.4345% -51 - C4 -4N98 4.8 DPO3B_ECOLI
66 PsiBlast_CBE 85.1745% -49 - C4 -4MJP 5.8 DPO3B_ECOLI
63 PsiBlast_CBE 85.1445% -49 - C4 -4MJR 4.3 DPO3B_ECOLI
47 PsiBlast_CBE 85.1145% -48 - C4 -4OVF 4.6 ?
81 PsiBlast_CBE 85.0545% -45 - C4 -3QSB 5.7 DPO3B_ECOLI
13 PsiBlast_PDB 84.7845% -47 - C4 -3D1G 5.2 DPO3B_ECOLI
79 PsiBlast_CBE 84.4145% -49 - C4 -4K3L 3.0 DPO3B_ECOLI
41 PsiBlast_CBE 84.1445% -51 - C4 -4PNU 5.3 ?
57 PsiBlast_CBE 83.9445% -51 - C4 -4N96 3.9 DPO3B_ECOLI
42 PsiBlast_CBE 83.7445% -52 - C4 -4PNU 6.5 ?
61 PsiBlast_CBE 83.4545% -43 - C4 -4N94 3.6 DPO3B_ECOLI
17 PsiBlast_PDB 83.0645% -48 - C4 -4K3L 3.1 DPO3B_ECOLI