@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VML7: (2017-11-09 )
MSNFLPAEEQLALIQRGTHEIISEEDLLKKLKENRPLKIKAGFDPTAPDLHLGHTVLINKLKTFQDLGHEVTFLIGDYTAMIGDPTGKSATRPPLSREQVEANAKTYQEQVFKILDPNKTKVRFNSEWFNQKSAADLIQLASQQTVSRMLERDDFTKRYNNHQPIAIHEFLYPLVQGYDSIALEADVELGGTDQTFNLLMGRTLQSRYGQESQVCITVPILEGLDGVNKMSKSLGNYIGVFDAPGAMYQKVLSMPDSLIERYFDLLSFKSLDEIKALLDEIAAGRNPQEVKRILALELVERFHDAEAAANAHKSAGNRITEGEVPADTPEVTISRGEFGGEIFIATILRVAGLNPNAAAAKDAVARGAVKVDWNVVDASFSVKENGTFIIQSGKKAIARVTFTD

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

YSA_C_3(1VBN)
SYY_ECOLI
[Raw transfer]



AZY_A_2(2YXN)
SYY_ECOLI
[Raw transfer]



AZY_A_2(2YXN)
SYY_ECOLI
[Raw transfer]



YSA_G_7(1VBM)
SYY_ECOLI
[Raw transfer]



TYA_C_3(3TS1)
SYY_GEOSE
[Raw transfer]



TYR_C_3(1WQ4)
SYY_ECOLI
[Raw transfer]



TYR_E_5(1X8X)
SYY_ECOLI
[Raw transfer]



IYR_C_3(1WQ3)
SYY_ECOLI
[Raw transfer]



TYB_A_8(1H3F)
SYY_THET2
[Raw transfer]



TYB_A_8(1H3F)
SYY_THET2
[Raw transfer]



TYB_A_8(1H3F)
SYY_THET2
[Raw transfer]



TYB_B_9(1H3F)
SYY_THET2
[Raw transfer]



ATP_A_5(1H3E)
SYY_THET2
[Raw transfer]



ATP_A_5(1H3E)
SYY_THET2
[Raw transfer]
41 HHSearch 81.3046% -4 - C2 -1H3F 3.5 SYY_THET2
40 HHSearch 80.5446% 3 - C2 -1H3E 4.7 SYY_THET2
29 Fugue 80.0845% -1 - C2 -1H3F 3.5 SYY_THET2
1 PsiBlast_PDB 79.3243% -0 - C2 -1H3F 3.5 SYY_THET2
2 PsiBlast_PDB 78.6943% 15 - C2 -1H3E 4.7 SYY_THET2
21 PsiBlast_CBE 78.3843% 0 - C2 -1H3F 2.4 SYY_THET2
5 PsiBlast_PDB 64.7530% -12 - C2 -2JAN - SYY_MYCTU -
44 HHSearch 60.3029% -1 - C2 -2JAN - SYY_MYCTU -
7 PsiBlast_PDB 59.7430% -1 - C2 -1VBM 6.7 SYY_ECOLI
13 PsiBlast_PDB 59.4029% -5 - C2 -1TYA - SYY_GEOSE -
14 PsiBlast_PDB 59.2329% -7 - C2 -1TYD - SYY_GEOSE -
3 PsiBlast_PDB 59.2228% 1 - C2 -2TS1 - SYY_GEOSE -
15 PsiBlast_PDB 59.1729% -5 - C2 -1TYC - SYY_GEOSE -
12 PsiBlast_PDB 59.0529% -8 - C2 -4TS1 - SYY_GEOSE -
43 HHSearch 58.8329% -3 - C2 -2JAN - SYY_MYCTU -
4 PsiBlast_PDB 58.6528% -1 - C2 -3TS1 6.1 SYY_GEOSE
10 PsiBlast_PDB 58.5730% -6 - C2 -1WQ4 2.8 SYY_ECOLI
6 PsiBlast_PDB 58.4730% -1 - C2 -1X8X 3.0 SYY_ECOLI
9 PsiBlast_PDB 58.1630% -4 - C2 -2YXN 2.8 SYY_ECOLI
11 PsiBlast_PDB 58.0730% -7 - C2 -1VBN 7.5 SYY_ECOLI
8 PsiBlast_PDB 57.8730% -6 - C2 -1WQ3 3.6 SYY_ECOLI
50 HHSearch 55.4230% 15 - C2 -2YXN 2.8 SYY_ECOLI