@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VMS3: (2017-11-10 )
MAKILVTGGAGYIGSHTCVELLEAGHEVIVFDNLSNSSKESLNRVQEITHKSLTFVEGDIRNSGELDQVFQEHAIDAVIHFAGLKAVGESQEKPLIYFDNNIAGSIQLVKSMEKAGVYTLVFSSSATVYDEANTSPLNEEMPTGMPSNNYGYTKLIVEQLLQKLSVADSKWSIALLRYFNPVGAHKSGRIGEDPQGIPNNLMPYVTQVAVGRREKLSIYGNDYDTIDGTGVRDYIHVVDLANAHLCALNNRLQAQGCRAWNIGTGNGSSVLQVKNTFEQVNGVPVAFEFAPRRAGDVATSFADNARAVAELGWKPQYGLEDMLKDSWNWQKQNPNGYN

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_5(1UDC)
GALE_ECOLI
[Raw transfer]




NAD_A_6(1A9Y)
GALE_ECOLI
[Raw transfer]




NAD_A_3(1KVT)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDB)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1XEL)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1KVS)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRL)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1A9Z)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1KVQ)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_6(1A9Y)
GALE_ECOLI
[Raw transfer]




NAI_B_7(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_C_16(4LIS)
?
[Raw transfer]




NAD_A_5(4LIS)
?
[Raw transfer]




NAD_B_7(5GY7)
GALE_ECOLI
[Raw transfer]




GUD_B_6(3ENK)
?
[Raw transfer]




NAD_A_6(1KVR)
GALE_ECOLI
[Raw transfer]




NAD_B_10(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_A_7(1HZJ)
GALE_HUMAN
[Raw transfer]




NAD_C_3(1EK5)
GALE_HUMAN
[Raw transfer]




NAD_A_4(5GY7)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1Z45)
GAL10_YEAST
[Raw transfer]




NAD_A_5(1KVU)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1LRJ)
GALE_ECOLI
[Raw transfer]




NAD_A_5(1UDA)
GALE_ECOLI
[Raw transfer]




NAD_A_4(5GY7)
GALE_ECOLI
[Raw transfer]




NAD_A_4(1NAI)
GALE_ECOLI
[Raw transfer]




NAD_B_10(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_B_5(3ENK)
?
[Raw transfer]




NAD_A_8(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAD_A_4(1LRK)
GALE_ECOLI
[Raw transfer]




NAD_B_9(1HZJ)
GALE_HUMAN
[Raw transfer]




GUD_A_4(3ENK)
?
[Raw transfer]




NAD_B_10(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_4(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_B_5(3ENK)
?
[Raw transfer]




NAD_B_6(2UDP)
GALE_ECOLI
[Raw transfer]




NAD_A_9(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_B_10(1I3K)
GALE_HUMAN
[Raw transfer]




NAD_A_4(1NAH)
GALE_ECOLI
[Raw transfer]




NAI_A_5(1EK6)
GALE_HUMAN
[Raw transfer]




NAD_A_3(3ENK)
?
[Raw transfer]




NAD_A_8(1I3M)
GALE_HUMAN
[Raw transfer]




NAD_A_8(1I3N)
GALE_HUMAN
[Raw transfer]




NAD_B_11(4LIS)
?
[Raw transfer]




NAD_A_8(1I3N)
GALE_HUMAN
[Raw transfer]




GDU_B_4(1I3L)
GALE_HUMAN
[Raw transfer]




GDU_A_3(1I3L)
GALE_HUMAN
[Raw transfer]




NAD_A_2(4WOK)
?
[Raw transfer]




NAD_A_2(4TWR)
?
[Raw transfer]




EDO_A_10(1UDC)
GALE_ECOLI
[Raw transfer]




EDO_A_7(1UDB)
GALE_ECOLI
[Raw transfer]




16 PsiBlast_PDB 96.2755% -77 - C1 -1KVT 12.1 GALE_ECOLI
1 PsiBlast_PDB 96.2455% -84 - C1 -1LRK 13.2 GALE_ECOLI
59 HHSearch 96.1155% -79 * C1 *1A9Y 12.3 GALE_ECOLI
10 PsiBlast_PDB 96.1055% -79 - C1 -1XEL 12.9 GALE_ECOLI
7 PsiBlast_PDB 95.7155% -77 - C1 -1NAI 12.8 GALE_ECOLI
13 PsiBlast_PDB 95.2955% -79 - C1 -1KVU 12.4 GALE_ECOLI
9 PsiBlast_PDB 95.1655% -77 - C1 -1UDB 13.1 GALE_ECOLI
17 PsiBlast_PDB 95.1154% -79 - C1 -1A9Z 12.3 GALE_ECOLI
6 PsiBlast_PDB 95.1055% -78 - C1 -1NAH 12.8 GALE_ECOLI
2 PsiBlast_PDB 94.8655% -79 - C1 -1LRL 12.5 GALE_ECOLI
15 PsiBlast_PDB 94.8154% -78 - C1 -1A9Y 12.3 GALE_ECOLI
4 PsiBlast_PDB 94.5855% -78 - C1 -1UDC 12.9 GALE_ECOLI
12 PsiBlast_PDB 94.5355% -80 - C1 -1KVS 11.7 GALE_ECOLI
3 PsiBlast_PDB 94.5355% -78 - C1 -2UDP 13.2 GALE_ECOLI
65 HHSearch 94.5155% -75 - C1 -5GY7 13.1 GALE_ECOLI
21 PsiBlast_CBE 94.4355% -80 - C1 -2UDP 12.7 GALE_ECOLI
11 PsiBlast_PDB 94.3155% -78 - C1 -1KVR 12.5 GALE_ECOLI
5 PsiBlast_PDB 94.3155% -78 - C1 -1LRJ 12.1 GALE_ECOLI
14 PsiBlast_PDB 94.2355% -78 - C1 -1KVQ 12.1 GALE_ECOLI
18 PsiBlast_PDB 93.7655% -74 - C1 -5GY7 13.1 GALE_ECOLI
22 PsiBlast_CBE 93.0555% -76 - C1 -5GY7 13.0 GALE_ECOLI
8 PsiBlast_PDB 93.0255% -76 - C1 -1UDA 13.1 GALE_ECOLI
36 PsiBlast_CBE 92.5652% -89 - C1 -3ENK 13.1 ?
71 HHSearch 92.2552% -85 - C1 -3ENK 13.1 ?
72 HHSearch 90.8052% -86 - C1 -3ENK 13.0 ?
35 PsiBlast_CBE 89.5952% -89 - C1 -3ENK 13.0 ?
78 Fugue 88.2051% -46 - C1 -1Z45 13.1 GAL10_YEAST
34 PsiBlast_CBE 83.4752% -50 - C1 -1Z45 13.1 GAL10_YEAST
37 PsiBlast_CBE 83.2150% -24 - C1 -4LIS 12.4 ?
39 PsiBlast_CBE 81.0250% -26 - C1 -4LIS 11.9 ?
38 PsiBlast_CBE 80.2750% -26 - C1 -4LIS 12.3 ?
62 HHSearch 78.3656% 23 - C1 -1I3K 12.7 GALE_HUMAN
63 HHSearch 78.2256% 26 - C1 -1I3N 12.6 GALE_HUMAN
25 PsiBlast_CBE 77.8455% 26 - C1 -1I3N 12.6 GALE_HUMAN
29 PsiBlast_CBE 77.6455% 24 - C1 -1I3L 12.5 GALE_HUMAN
28 PsiBlast_CBE 77.4655% 23 - C1 -1I3L 12.7 GALE_HUMAN
20 PsiBlast_PDB 77.3055% 25 - C1 -1I3K 12.4 GALE_HUMAN
27 PsiBlast_CBE 77.1855% 25 - C1 -1I3M 12.5 GALE_HUMAN
32 PsiBlast_CBE 76.7655% 23 - C1 -1EK6 12.8 GALE_HUMAN
30 PsiBlast_CBE 76.7555% 24 - C1 -1I3K 12.7 GALE_HUMAN
24 PsiBlast_CBE 76.7055% 23 - C1 -1I3N 12.4 GALE_HUMAN
26 PsiBlast_CBE 76.4455% 23 - C1 -1I3M 12.2 GALE_HUMAN
19 PsiBlast_PDB 75.3855% 21 - C1 -1HZJ 13.0 GALE_HUMAN
31 PsiBlast_CBE 75.1155% 26 - C1 -1EK6 12.7 GALE_HUMAN
23 PsiBlast_CBE 75.0655% 24 - C1 -1HZJ 11.2 GALE_HUMAN
33 PsiBlast_CBE 73.9355% 28 - C1 -1EK5 11.6 GALE_HUMAN
46 PsiBlast_CBE 69.8339% -58 - C1 -4WOK 8.2 ?
47 PsiBlast_CBE 68.4439% -57 - C1 -4TWR 7.0 ?