@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VMU1: (2017-11-10 )
MSQNKIWVIDDDRAMRWVLEKTFKEEGFDVTNFEEAQTALERLHHDAPDVILTDIRMPGIDGLTFLSKVKNSHPDLPVIIMTAHSDLESAVSSYQTGAFEYLPKPFDIDEALALVNRAILHINKLQQQEATKTASPLQSTEIIGESPAMQEVFRAIGRLSQSHITVLINGESGTGKELVAHALHKHSPRRAKPFIALNMAAIPKDLIETELFGHEKGAFTGANTQHQGRFEQANGGTLFLDEIGDMPFETQTRLLRVLADGEFYRVGGHIPVKVDVRIVAATHQDLEKLVNEGRFREDLYHRLNVIRIHIPKLAHRSEDIPMLAQHFLARAGKELGVSPKILRTETTDYMQQLPWPGNVRQLENTCRWLTVMITGREVYPEDLPSELKQVPLQKSSETSQPAPSFERISLHHWDELLSQWAIQKLKNGEMKILDIATPMFERTLINAALQQTRGRKRHAAELLGWGRNTLTRKLKELGMDSADDDDEDEHKATLSEA

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AGS_A_2(5EXS)
?
[Raw transfer]



AGS_A_2(5EXS)
?
[Raw transfer]



ATP_A_2(5EP4)
?
[Raw transfer]



ATP_A_2(2C96)
PSPF_ECOLI
[Raw transfer]



ATP_B_6(5M7N)
?
[Raw transfer]



ADP_A_2(5EXT)
?
[Raw transfer]



ANP_A_2(2C99)
PSPF_ECOLI
[Raw transfer]



ADP_A_8(1NY5)
?
[Raw transfer]



ATP_A_2(4QNR)
PSPF_ECOLI
[Raw transfer]



ADP_A_8(1NY5)
?
[Raw transfer]



ATP_A_3(2C9C)
PSPF_ECOLI
[Raw transfer]



ADP_B_9(1NY5)
?
[Raw transfer]



ADP_A_3(3DZD)
?
[Raw transfer]



ADP_A_2(2C98)
PSPF_ECOLI
[Raw transfer]



AMP_A_2(2VII)
PSPF_ECOLI
[Raw transfer]



AMP_A_2(2VII)
PSPF_ECOLI
[Raw transfer]



ADP_B_4(4BT1)
?
[Raw transfer]



ADP_B_4(4BT0)
?
[Raw transfer]



ADP_B_4(4BS1)
?
[Raw transfer]



ADP_B_4(4BS1)
?
[Raw transfer]



AZU_A_2(5EP2)
?
[Raw transfer]



5QT_A_2(5EP3)
?
[Raw transfer]



EDO_A_5(5EXP)
?
[Raw transfer]



EDO_A_5(5EXP)
?
[Raw transfer]



C2E_A_4(5EXX)
?
[Raw transfer]
227 Fugue 89.0340%-124 - C5 -1NY5 6.2 ?
21 PsiBlast_CBE 88.3041%-128 - C5 -1NY5 5.7 ?
1 PsiBlast_PDB 87.5741%-127 - C5 -1NY5 6.2 ?
22 PsiBlast_CBE 86.9335%-122 - C5 -5M7P - ? -
24 PsiBlast_CBE 86.6535%-124 - C5 -5M7N 4.5 ?
2 PsiBlast_PDB 83.8438%-109 - C5 -3DZD 5.4 ?
6 PsiBlast_PDB 82.1941% -95 - C5 -5EP0 - ? -
210 HHSearch 80.2238% -97 - C5 -3DZD - ? -
228 Fugue 73.6747%-101 - C5 -1OJL - ZRAR_SALTY -
205 HHSearch 73.1746% -91 - C5 -1OJL - ZRAR_SALTY -
3 PsiBlast_PDB 72.8735% 21 * C6 *5M7N - ? -
5 PsiBlast_PDB 71.7435% 26 - C6 -5M7P - ? -
4 PsiBlast_PDB 71.6635% 22 - C5 -5M7O - ? -
16 PsiBlast_PDB 70.5048%-120 - C5 -5EXP 3.1 ?
7 PsiBlast_PDB 70.2442% -96 - C5 -1OJL - ZRAR_SALTY -
19 PsiBlast_PDB 69.9649%-115 - C5 -5EP1 - ? -
13 PsiBlast_PDB 69.9449%-113 - C5 -5EP2 2.7 ?
15 PsiBlast_PDB 69.8149%-116 - C5 -5EP4 6.0 ?
14 PsiBlast_PDB 69.3949%-114 - C5 -5EP3 3.7 ?
17 PsiBlast_PDB 69.3448%-117 - C5 -5EXS 8.0 ?
18 PsiBlast_PDB 69.3248%-116 - C5 -5EXT 8.5 ?
212 HHSearch 68.7349%-120 - C5 -5EXP 3.1 ?
213 HHSearch 68.0449%-119 - C5 -5EXS 7.9 ?
115 PsiBlast_CBE 64.1744% -98 - C5 -4QNR 6.6 PSPF_ECOLI
116 PsiBlast_CBE 63.1844% -95 - C5 -2C9C 6.7 PSPF_ECOLI
112 PsiBlast_CBE 62.5644% -93 - C5 -2C99 7.8 PSPF_ECOLI
114 PsiBlast_CBE 62.0444%-100 - C5 -2C96 8.4 PSPF_ECOLI
95 PsiBlast_CBE 61.2956%-139 - C5 -4BT1 5.0 ?
20 PsiBlast_PDB 61.2956%-139 - C5 -4BS1 4.9 ?
221 HHSearch 60.9856%-134 - C5 -4BS1 4.7 ?
96 PsiBlast_CBE 60.9056%-139 - C5 -4BT0 4.8 ?
113 PsiBlast_CBE 60.3244% -88 - C5 -2C98 7.7 PSPF_ECOLI
111 PsiBlast_CBE 60.2144% -90 - C5 -2VII 5.3 PSPF_ECOLI
218 HHSearch 60.0842% -92 * C5 *2VII 5.3 PSPF_ECOLI