@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VMV7: (2017-11-11 )
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIAQCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSETKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRYFEENTQIAEEIERNIREQLLTTGTNGAVQIEDEEEPDLLLES

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAP_B_2(1MO4)
RECA_MYCTU
[Raw transfer]




DTP_B_2(1MO6)
RECA_MYCTU
[Raw transfer]




ADP_A_2(2ZRD)
RECA_MYCS2
[Raw transfer]




SAP_B_2(2ODW)
RECA_MYCS2
[Raw transfer]




DTP_B_2(1UBG)
RECA_MYCS2
[Raw transfer]




AGS_A_2(2ZRE)
RECA_MYCS2
[Raw transfer]




DTP_B_2(2ODN)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRM)
RECA_MYCS2
[Raw transfer]




ADP_A_2(2ZRO)
RECA_MYCS2
[Raw transfer]




ADP_B_2(1MO3)
RECA_MYCTU
[Raw transfer]




AGS_A_2(2ZRA)
RECA_MYCS2
[Raw transfer]




AGS_A_2(2ZRJ)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRK)
RECA_MYCS2
[Raw transfer]




ADP_A_2(5JRJ)
?
[Raw transfer]




ADP_B_2(2OEP)
RECA_MYCS2
[Raw transfer]




ADP_A_2(5JRJ)
?
[Raw transfer]




DTP_A_2(2ZRF)
RECA_MYCS2
[Raw transfer]




ADP_A_3(1G18)
RECA_MYCTU
[Raw transfer]




DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]




SAP_B_2(1UBF)
RECA_MYCS2
[Raw transfer]




ANP_A_3(1XMS)
RECA_ECOLI
[Raw transfer]




DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]




SAP_B_2(1MO5)
RECA_MYCTU
[Raw transfer]




DTP_A_2(2ZRG)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRP)
RECA_MYCS2
[Raw transfer]




ADP_B_2(1UBE)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRL)
RECA_MYCS2
[Raw transfer]




GOL_A_2(4PQY)
RECA_MYCTU
[Raw transfer]




GOL_A_5(4PR0)
RECA_MYCTU
[Raw transfer]




ADP_B_2(1REA)
RECA_ECOLI
[Raw transfer]




44 HHSearch 88.6374%-100 - C2 -3CMW - RECA_ECOLI -
51 HHSearch 87.9674%-102 - C2 -3CMW - RECA_ECOLI -
46 HHSearch 87.5074% -97 - C2 -3CMT - RECA_ECOLI -
3 PsiBlast_PDB 87.4374% -90 - C2 -4TWZ - RECA_ECOLI -
53 HHSearch 86.5874% -99 - C2 -3CMT - RECA_ECOLI -
52 HHSearch 86.0674% -93 - C2 -3CMU - RECA_ECOLI -
45 HHSearch 86.0674% -92 - C2 -3CMU - RECA_ECOLI -
4 PsiBlast_PDB 85.2772%-104 - C2 -5JRJ 7.8 ?
1 PsiBlast_PDB 84.4274%-103 - C2 -1XMS 6.4 RECA_ECOLI
18 PsiBlast_PDB 83.5265% -88 - C2 -2ZRO 7.6 RECA_MYCS2
54 HHSearch 83.1674% -93 - C2 -3CMV - RECA_ECOLI -
21 PsiBlast_CBE 82.9965% -95 - C2 -2ZRA 6.0 RECA_MYCS2
32 PsiBlast_CBE 82.7664% -86 - C2 -4PQY 2.3 RECA_MYCTU
29 PsiBlast_CBE 82.6565% -90 - C2 -2ZRJ 6.9 RECA_MYCS2
31 PsiBlast_CBE 82.2264% -84 - C2 -4PR0 2.3 RECA_MYCTU
23 PsiBlast_CBE 82.1065% -93 - C2 -2ZRF 7.3 RECA_MYCS2
26 PsiBlast_CBE 82.0165% -82 - C2 -2ZRC - RECA_MYCS2 -
19 PsiBlast_PDB 82.0065% -92 - C2 -2ZRP 6.0 RECA_MYCS2
17 PsiBlast_PDB 81.9365% -86 - C2 -2ZRM 6.6 RECA_MYCS2
24 PsiBlast_CBE 81.5765% -89 - C2 -2ZRE 5.2 RECA_MYCS2
28 PsiBlast_CBE 81.5665% -86 - C2 -2ZRK 8.0 RECA_MYCS2
34 PsiBlast_CBE 81.4664% -85 - C2 -1MO5 5.7 RECA_MYCTU
25 PsiBlast_CBE 81.3765% -86 - C2 -2ZRD 6.6 RECA_MYCS2
22 PsiBlast_CBE 80.8965% -95 - C2 -2ZRG 6.6 RECA_MYCS2
10 PsiBlast_PDB 80.5665% -83 - C2 -2ODN 7.7 RECA_MYCS2
33 PsiBlast_CBE 80.0764% -95 - C2 -1MO6 6.7 RECA_MYCTU
35 PsiBlast_CBE 79.8164% -84 - C2 -1MO4 4.7 RECA_MYCTU
13 PsiBlast_PDB 79.7265% -84 - C2 -2OEP 5.9 RECA_MYCS2
7 PsiBlast_PDB 79.7065% -83 - C2 -1UBF 6.8 RECA_MYCS2
36 PsiBlast_CBE 79.6964% -86 - C2 -1MO3 6.2 RECA_MYCTU
9 PsiBlast_PDB 79.6065% -95 - C2 -2G88 8.5 RECA_MYCS2
37 PsiBlast_CBE 79.2964% -87 - C2 -1G18 5.8 RECA_MYCTU
39 HHSearch 79.2664% -90 - C2 -2G88 8.5 RECA_MYCS2
11 PsiBlast_PDB 79.1165% -86 - C2 -2ODW 5.7 RECA_MYCS2
8 PsiBlast_PDB 79.1165% -76 - C2 -1UBG 6.6 RECA_MYCS2
27 PsiBlast_CBE 78.7465% -84 - C2 -2ZRL 5.5 RECA_MYCS2
2 PsiBlast_PDB 78.2674% - - C2 -1REA 2.7 RECA_ECOLI
6 PsiBlast_PDB 77.8665% -84 - C2 -1UBE 5.6 RECA_MYCS2
41 HHSearch 67.5771% 35 - C2 -5JRJ 7.8 ?