@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VMY7: (2017-11-11 )
MKHIVIPARFSSSRLPGKPLLLIHDRPMILRVVDQAKKVEGFDDLCVATDDERIAEICRAEGVDVVLTSADHPSGTDRLSEVARIKGWDADDIIVNVQGDEPLLPAQLVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDSIVKVVMSKQNEALYFSRATIPYDRDSAKQAEPTLHSQAFRHLGLYAYRVSLLQEYVTWEMGKLEKLESLEQLRVLENGHRIAIAVAEANLPPGVDTQADLDRLNNMPVESFE

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTP_D_16(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_B_9(2Y6P)
KDSB_AQUAE
[Raw transfer]



CTP_B_10(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_C_12(2Y6P)
KDSB_AQUAE
[Raw transfer]



CTP_A_7(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_C_13(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_A_4(2Y6P)
KDSB_AQUAE
[Raw transfer]



CTP_A_7(3K8D)
KDSB_ECOLI
[Raw transfer]



CTP_B_6(1GQ9)
KPSU5_ECOLX
[Raw transfer]



CMK_A_4(1GQC)
KPSU5_ECOLX
[Raw transfer]



CDP_B_4(1H7H)
KPSU5_ECOLX
[Raw transfer]



CMK_A_4(1VH3)
KDSB_HAEIN
[Raw transfer]



C5P_B_4(1H7T)
KPSU5_ECOLX
[Raw transfer]



C5P_B_6(1GQC)
KPSU5_ECOLX
[Raw transfer]



CDP_A_3(1H7H)
KPSU5_ECOLX
[Raw transfer]



CTP_A_4(1GQ9)
KPSU5_ECOLX
[Raw transfer]



C5P_B_3(1H7F)
KPSU5_ECOLX
[Raw transfer]



CTP_B_4(1H7G)
KPSU5_ECOLX
[Raw transfer]



KDO_A_3(3DUV)
KDSB_HAEIN
[Raw transfer]



IMD_A_2(3JTJ)
KDSB_YERPE
[Raw transfer]



IMD_A_2(3JTJ)
KDSB_YERPE
[Raw transfer]
2 PsiBlast_PDB 80.0098% - - C- -3POL - KDSB_ACIBT -
1 PsiBlast_PDB 80.0098% - - C- -4FCU - KDSB_ACIBT -
12 PsiBlast_PDB 79.4346%-132 - C1 -3JTJ 3.3 KDSB_YERPE
34 HHSearch 78.1397% - - C- -4FCU - KDSB_ACIBT -
4 PsiBlast_PDB 76.2946%-129 - C1 -3K8E - KDSB_ECOLI -
21 PsiBlast_CBE 75.3746%-111 - C1 -3K8D 7.8 KDSB_ECOLI
7 PsiBlast_PDB 75.2045%-128 - C1 -1VH1 - KDSB_ECOLI -
16 PsiBlast_PDB 75.1943%-108 - C1 -1H7G - KPSU5_ECOLX -
22 PsiBlast_CBE 75.1346%-113 - C1 -3K8D 8.1 KDSB_ECOLI
23 PsiBlast_CBE 74.9246%-111 - C1 -3K8D 8.2 KDSB_ECOLI
14 PsiBlast_PDB 74.7543%-106 - C1 -1H7E - KPSU5_ECOLX -
3 PsiBlast_PDB 74.2646%-112 - C1 -3K8D 8.3 KDSB_ECOLI
17 PsiBlast_PDB 73.8643%-104 - C1 -1H7H 4.0 KPSU5_ECOLX
28 PsiBlast_CBE 73.8143%-104 - C1 -1H7F 4.8 KPSU5_ECOLX
44 HHSearch 73.7544% -93 - C1 -3TQD - KDSB_COXBU -
26 PsiBlast_CBE 73.5143%-106 - C1 -1H7H 5.4 KPSU5_ECOLX
15 PsiBlast_PDB 73.3943%-104 - C1 -1H7F - KPSU5_ECOLX -
29 PsiBlast_CBE 73.3443% -98 - C1 -1GQC 4.6 KPSU5_ECOLX
18 PsiBlast_PDB 73.2543%-103 - C1 -1H7T - KPSU5_ECOLX -
27 PsiBlast_CBE 72.8743%-104 - C1 -1H7G 5.3 KPSU5_ECOLX
37 HHSearch 72.3344% -75 - C1 -3K8D 8.3 KDSB_ECOLI
30 PsiBlast_CBE 71.9543%-100 - C1 -1GQ9 5.7 KPSU5_ECOLX
25 PsiBlast_CBE 71.6243%-100 - C1 -1H7T 4.0 KPSU5_ECOLX
20 PsiBlast_PDB 71.5743% -98 - C1 -1GQC 7.5 KPSU5_ECOLX
19 PsiBlast_PDB 70.2543% -98 - C1 -1GQ9 4.5 KPSU5_ECOLX
36 HHSearch 65.8842% -73 - C1 -3JTJ 3.3 KDSB_YERPE
11 PsiBlast_PDB 64.9043% -85 - C1 -3DUV 4.7 KDSB_HAEIN
10 PsiBlast_PDB 64.3543%-104 - C1 -1VH3 7.2 KDSB_HAEIN
31 PsiBlast_CBE 57.6536% -59 - C1 -2Y6P 7.2 KDSB_AQUAE
32 PsiBlast_CBE 56.5936% -55 - C1 -2Y6P 7.2 KDSB_AQUAE
33 PsiBlast_CBE 56.3036% -53 - C1 -2Y6P 8.0 KDSB_AQUAE