@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VN02: (2017-11-11 )
MTTEALNKSDLIERIALKNPHLAEPLVEEAVKIMIDQMIEALSSDNRIEIRGFGSFALHHREPRVGRNPKTGKSVDVAAKAVPHFKPGKALRDAVNESGK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_D_2(2HT0)
IHFB_ECOLI
[Raw transfer]

-

NACID_E_3(1OUZ)
IHFB_ECOLI
[Raw transfer]

-

NACID_E_3(1OWG)
IHFB_ECOLI
[Raw transfer]

-

NACID_E_3(1OWG)
IHFB_ECOLI
[Raw transfer]

-

NACID_E_3(1OWF)
IHFB_ECOLI
[Raw transfer]

-

NACID_E_3(1IHF)
IHFB_ECOLI
[Raw transfer]

-

NACID_E_3(1IHF)
IHFB_ECOLI
[Raw transfer]

-

NACID_C_1(2HT0)
IHFB_ECOLI
[Raw transfer]

-

6 PsiBlast_PDB 90.5955% -63 - C7 -1OWF 4.5 IHFB_ECOLI
62 Fugue 90.1756% -49 - C7 -1IHF 4.9 IHFB_ECOLI
1 PsiBlast_PDB 90.1756% -49 - C7 -1IHF 4.9 IHFB_ECOLI
2 PsiBlast_PDB 89.1856% -57 - C7 -1OWG 1128214396763122245304320.0 IHFB_ECOLI
3 PsiBlast_PDB 88.7656% -58 - C7 -2HT0 5.5 IHFB_ECOLI
49 HHSearch 88.0956% -57 - C7 -1OWG 1128214396763122245304320.0 IHFB_ECOLI
4 PsiBlast_PDB 86.6956% -42 - C7 -5J0N - IHFB_ECOLI -
5 PsiBlast_PDB 85.6155% -53 - C7 -1OUZ 1128214396763122245304320.0 IHFB_ECOLI
40 HHSearch 78.3239% -53 - C7 -4QJN - DBH_STAAM -
23 PsiBlast_CBE 78.0440% -43 - C7 -4QJU - DBH_STAAM -
54 HHSearch 76.7541% -66 - C7 -4YF0 - DBHA_ECOLI -
19 PsiBlast_PDB 75.8741%-107 - C7 -4YFH - DBHA_ECOLI -
22 PsiBlast_CBE 75.6240% -26 - C7 -4QJU - DBH_STAAM -
20 PsiBlast_PDB 75.2641% -84 - C7 -4YF0 - DBHA_ECOLI -
34 PsiBlast_CBE 73.5731% -33 - C7 -1OWG - IHFA_ECOLI -
50 HHSearch 72.7741% -96 - C7 -1MUL - DBHA_ECOLI -
9 PsiBlast_PDB 72.5041% -85 - C7 -2O97 - DBHB_ECOLI -
16 PsiBlast_PDB 72.4441% -96 - C7 -1MUL - DBHA_ECOLI -
61 HHSearch 71.9441% -84 - C7 -4YFT - DBHB_ECOLI -
12 PsiBlast_PDB 71.9140% -82 - C7 -4YFT - DBHB_ECOLI -