@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VNB8: (2017-11-13 )
MNEIYPVPEEFKKTARTVEADYFKRYQHSIENPDEFWAEQAKIVDWIKPFTQVKNTSFDKDNFKIEWFADGELNVSANCLDRHLKEHPHKPAIIWEGDHPSRHKIVSYKELHDEVCRFANVLKKYGIGKGDRVVLYMPMVTEAAIAMLACARIGAVHCVVFGGFSPDSLASRIEDSQAKLVITADSSLRAGKLLPLKENVDLALALPGTECVENVIVVYRNANPIEMKLGRDLWYHLIIMEVDANCPPEPMKAEDPLFILYTSGSTGKPKGVLHTTGGYLVYVASTFKEVFDLKQDDVYWCTADVGWITGHSYLIYGPLANGTTTLMFEGVPQYPTWARLGHVVDKHKVSILYTAPTAIRAMMREGDSYVRESNRSSLRLLGSVGEPINPEAWNWYYNVVGEGRCPIVDTWWQTETGGILIAPLPGATALKPGSATRPLFGIQPAIVDGEGNELEGAAEGNLVIKDSWPGQMRTIWGDPDRFIEAYFSTFKNTYFTGDGARRDEDGYCWITGRVDDVLNVSGHRLGTAEIESALVSHEAVAEAAVVGMPHDIKGQGICTFVTLQAGVPESEELRKELISWVRKVLGPVASPDALHWAPALPKTRSGKIMRRILRKIAANELDSLGDTSTLAEPAVVDQLIATVYPDRQK

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_7(1PG4)
ACSA_SALTY
[Raw transfer]



COA_D_4(2P2J)
ACSA_SALTY
[Raw transfer]



COA_B_8(1PG4)
ACSA_SALTY
[Raw transfer]



AMP_H_8(2P2F)
ACSA_SALTY
[Raw transfer]



PRX_B_4(2P20)
ACSA_SALTY
[Raw transfer]



PRX_D_4(2P2Q)
ACSA_SALTY
[Raw transfer]



PRX_D_4(2P2M)
ACSA_SALTY
[Raw transfer]



COA_F_6(2P2F)
ACSA_SALTY
[Raw transfer]



COA_B_6(1PG3)
ACSA_SALTY
[Raw transfer]



PRX_A_3(2P20)
ACSA_SALTY
[Raw transfer]



GOL_B_23(3ETC)
?
[Raw transfer]



GOL_B_21(3ETC)
?
[Raw transfer]



AMP_D_4(1RY2)
ACS1_YEAST
[Raw transfer]



UNL_A_6(3C5E)
ACS2A_HUMAN
[Raw transfer]



COA_D_4(2P2B)
ACSA_SALTY
[Raw transfer]



EDO_A_10(1PG3)
ACSA_SALTY
[Raw transfer]



EDO_A_12(1PG4)
ACSA_SALTY
[Raw transfer]
1 PsiBlast_PDB 86.7467%-104 - C6 -2P2F - ACSA_SALTY -
22 PsiBlast_CBE 86.6767% -99 - C6 -5JRH - ACSA_SALTY -
42 HHSearch 86.5565% -99 - C6 -2P20 8.0 ACSA_SALTY
26 PsiBlast_CBE 86.5266%-101 - C6 -2P2J 5.7 ACSA_SALTY
7 PsiBlast_PDB 86.4966%-102 - C6 -2P20 - ACSA_SALTY -
41 HHSearch 86.2665% -98 - C6 -5JRH - ACSA_SALTY -
3 PsiBlast_PDB 86.1267%-101 - C6 -2P2M - ACSA_SALTY -
5 PsiBlast_PDB 86.0266% -98 - C6 -2P2Q - ACSA_SALTY -
27 PsiBlast_CBE 86.0166%-102 - C6 -2P20 7.6 ACSA_SALTY
2 PsiBlast_PDB 85.9967%-101 - C6 -5JRH - ACSA_SALTY -
21 PsiBlast_CBE 85.9367%-102 - C6 -2P2F 6.2 ACSA_SALTY
8 PsiBlast_PDB 85.8266%-102 - C6 -1PG3 2.7 ACSA_SALTY
23 PsiBlast_CBE 85.6967% -99 - C6 -2P2M 7.6 ACSA_SALTY
28 PsiBlast_CBE 85.6266%-101 - C6 -1PG4 6.8 ACSA_SALTY
60 Fugue 85.6064% -96 - C6 -1PG4 6.9 ACSA_SALTY
6 PsiBlast_PDB 85.6066%-102 - C6 -2P2J - ACSA_SALTY -
25 PsiBlast_CBE 85.5066%-102 - C6 -2P2Q 7.3 ACSA_SALTY
29 PsiBlast_CBE 85.4566%-101 - C6 -1PG3 6.3 ACSA_SALTY
24 PsiBlast_CBE 85.1166% -99 - C6 -2P2B 6.2 ACSA_SALTY
9 PsiBlast_PDB 84.9266%-100 - C6 -1PG4 3.5 ACSA_SALTY
43 HHSearch 64.5148% 7 * C6 *1RY2 5.1 ACS1_YEAST