@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VNC8: (2017-11-13 )
MSDVIKDLSELRLSYEQGELYETQVASNPHEQFLGWFNHALAANLHEPYAMSLATASASGRPHVRTVLLRGATEAGYDFYTNYDSQKGIDLAENPYAELLFYWPSLERQVRVGGHVVKIPEQESTDYYHKRPRDSQIAAYISTPQSGKIESRELLQQRFQDLQQQVQSHEVLDKPEFWGGYRLQPDYYEFWQGRPNRLHDRLSYEKIDGQWTLHRLMP

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NNV_A_4(4HMT)
PHZG_PSEFL
[Raw transfer]



WUB_A_4(4HMX)
?
[Raw transfer]



WUB_A_5(4HMV)
PHZG_PSEFL
[Raw transfer]



NNV_B_9(4HMT)
PHZG_PSEFL
[Raw transfer]



WUB_A_6(4HMU)
PHZG_PSEFL
[Raw transfer]



FMN_C_3(1CI0)
PDX3_YEAST
[Raw transfer]



FMN_C_3(1CI0)
PDX3_YEAST
[Raw transfer]



FMN_C_3(1CI0)
PDX3_YEAST
[Raw transfer]



FMN_A_3(1JNW)
PDXH_ECOLI
[Raw transfer]



FMN_F_6(1WV4)
PDXH_ECOLI
[Raw transfer]



FMN_D_4(1CI0)
PDX3_YEAST
[Raw transfer]



FMN_D_4(1CI0)
PDX3_YEAST
[Raw transfer]



FMN_E_5(1WV4)
PDXH_ECOLI
[Raw transfer]
38 HHSearch 93.4541%-101 - C1 -1DNL - PDXH_ECOLI -
9 PsiBlast_PDB 92.5141%-100 - C1 -1DNL - PDXH_ECOLI -
8 PsiBlast_PDB 92.3540% -92 - C1 -1JNW 3.8 PDXH_ECOLI
4 PsiBlast_PDB 91.8740% -97 - C1 -1G79 - PDXH_ECOLI -
7 PsiBlast_PDB 90.4640%-102 - C1 -1G78 - PDXH_ECOLI -
6 PsiBlast_PDB 89.8440% -95 - C1 -1G77 - PDXH_ECOLI -
3 PsiBlast_PDB 89.0140% -98 - C1 -1G76 - PDXH_ECOLI -
52 Fugue 80.1441% -15 - C1 -1DNL - PDXH_ECOLI -
11 PsiBlast_PDB 77.3541%-100 - C1 -2A2J - PDXH_MYCTU -
5 PsiBlast_PDB 75.9240% -98 - C1 -1WV4 3.2 PDXH_ECOLI
31 HHSearch 75.7838% 15 - C1 -1CI0 3.1 PDX3_YEAST
34 HHSearch 74.8344% 33 * C1 *1NRG - PNPO_HUMAN -
21 PsiBlast_CBE 74.6540%-105 - C1 -1WV4 3.1 PDXH_ECOLI
53 Fugue 74.5238% 14 - C1 -1CI0 3.1 PDX3_YEAST
10 PsiBlast_PDB 74.1536% 16 - C1 -1CI0 3.1 PDX3_YEAST
30 HHSearch 73.3238% 16 - C1 -1CI0 3.2 PDX3_YEAST
22 PsiBlast_CBE 71.4836% 17 - C1 -1CI0 3.2 PDX3_YEAST
29 PsiBlast_CBE 70.8731% -70 - C1 -4HMW - ? -
28 PsiBlast_CBE 70.1731% -69 - C1 -4HMX - ? -
18 PsiBlast_PDB 70.1731% -64 - C1 -4HMW - ? -
19 PsiBlast_PDB 69.7731% -61 - C1 -4HMX 3.2 ?
13 PsiBlast_PDB 62.9132% -10 - C1 -4HMT 2.9 PHZG_PSEFL
24 PsiBlast_CBE 61.2232% -8 - C1 -4HMU 3.0 PHZG_PSEFL
25 PsiBlast_CBE 60.6732% -12 - C1 -4HMT 2.9 PHZG_PSEFL
23 PsiBlast_CBE 59.7232% -8 - C1 -4HMV 3.0 PHZG_PSEFL