@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VND0: (2017-11-13 )
MIISSGNDYRAAAQRRLPPFLFHYIDGGAYAEYTLKRNVQDLSEIALRQRVLNDMSALSLETKLFNETLSMPVALAPVGLTGMYARRGEVQAAMAADKKGIPFTLSTVSVCPIEEVAPAINRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPVPGARYRDAHSGMSGPNAAMRRYMQSVFHPHWSWNVGLMGRPHDLGNISKYLGKPTGLEDYIGWLGSNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVMSSARALPAIADAVKGDLAILADSGIRNGLDVVRMLALGADTVLLGRAFVYALAAAGGQGVSNLLDLIDKEMRVAMTLTGAKSISDINTDCLVQAIKQGL

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLV_A_3(2RDU)
HAOX1_HUMAN
[Raw transfer]



3IL_M_13(2A7P)
GOX_SPIOL
[Raw transfer]



PYR_B_7(1KBI)
CYB2_YEAST
[Raw transfer]



FMN_I_9(1P5B)
GOX_SPIOL
[Raw transfer]



FMN_E_5(2A7N)
GOX_SPIOL
[Raw transfer]



LAC_A_4(2NLI)
?
[Raw transfer]



EDO_A_4(2ZFA)
?
[Raw transfer]



EDO_B_6(2ZFA)
?
[Raw transfer]



LAC_A_4(2NLI)
?
[Raw transfer]



LAC_B_7(2NLI)
?
[Raw transfer]



HOC_M_13(2A85)
GOX_SPIOL
[Raw transfer]
132 HHSearch 90.7135%-113 - C2 -3GIY - MDLB_PSEPU -
4 PsiBlast_PDB 89.7335%-110 - C2 -2A7N 9.9 GOX_SPIOL
133 HHSearch 89.6735%-111 - C2 -1P4C - GOX_SPIOL -
7 PsiBlast_PDB 89.4035%-109 - C2 -3GIY - MDLB_PSEPU -
6 PsiBlast_PDB 88.6835%-111 - C2 -2A85 2.7 GOX_SPIOL
3 PsiBlast_PDB 88.6735%-108 - C2 -1P5B 9.6 GOX_SPIOL (first)
2 PsiBlast_PDB 88.3635%-108 - C2 -1P4C - GOX_SPIOL -
5 PsiBlast_PDB 88.2235%-113 - C2 -2A7P 3.1 GOX_SPIOL (first)
1 PsiBlast_PDB 87.7735%-110 - C2 -1HUV - GOX_SPIOL (first) -
134 HHSearch 87.4434%-119 - C2 -1GOX - GOX_SPIOL -
130 HHSearch 86.3034%-117 - C2 -1AL7 - GOX_SPIOL -
12 PsiBlast_PDB 86.0934%-118 - C2 -1GOX - GOX_SPIOL -
13 PsiBlast_PDB 85.0034%-114 - C2 -1AL7 - GOX_SPIOL -
14 PsiBlast_PDB 83.7934%-120 - C2 -1AL8 - GOX_SPIOL -
127 HHSearch 83.1834% -46 - C2 -2RDU - HAOX1_HUMAN -
8 PsiBlast_PDB 80.4434% -51 - C2 -2RDT - HAOX1_HUMAN -
9 PsiBlast_PDB 79.8934% -35 - C2 -2RDU 2.9 HAOX1_HUMAN
10 PsiBlast_PDB 79.6534% -37 - C2 -2RDW - HAOX1_HUMAN -
131 HHSearch 79.1232% -49 - C2 -2DU2 - ? -
22 PsiBlast_CBE 78.7634% -47 - C2 -2W0U - HAOX1_HUMAN -
137 HHSearch 76.4132% -44 - C2 -2NLI 4.2 ?
50 PsiBlast_CBE 73.6031% -47 - C2 -2ZFA 3.0 ?
60 PsiBlast_CBE 72.4131% -44 - C2 -2NLI 2.9 ?
51 PsiBlast_CBE 71.7131% -20 - C2 -2ZFA 2.2 ?
61 PsiBlast_CBE 71.3431% -20 - C2 -2NLI 4.2 ?
135 HHSearch 70.5130% -14 - C2 -1KBI 4.0 CYB2_YEAST