@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VNG2: (2017-11-14 )
MMDYQNAVQAFDLESTAKQMLSGSLDALNACYECCDRHADGDKIALYWQGKDGRKEQYTFRELKEWSSQFANFLKSQGVKAGDRISGLLPRTPELIVTILAAWRIGAVYQPLFTAFGPKAIEHRIQLAQSKLVVTDMGNRSKLDEIEKCPAIMTVADAQGTPLKAGDFNFWNEVKQQSDQCDLVMRSIQDPFLLMFTSGTTGPAKPLEVPLKALIAFGRYMQDAIGLTEEDSFWNIADPGWAYGLYYAITGPLFLGHATLFYEGGFSIDSLCQIVKDYKVNNLAGAPTAYRMMMAADPAQMAPLKGQFRVVSSAGEPLNPEVIRWFKQVLDAPIYDHYGQTEVGMVVCNHHGLKHEIHAGSAGFPSPGYRVAIVNEQGEELPPDTPGILAVDISQSPMMWFGGYKESRKSPFIGHYYLTGDTAELHADGSMSFVGRSDDVITTSGYRIGPFDVESALLEHDAVIEAAVIGVPDPDRTEVVKAFVILAAGIQPSDALAEELSQFVKRRLSAHAYPRLVEFVSELPKTPSGKIQRFLLRNQEIAKQQAKAG

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_7(3C5E)
ACS2A_HUMAN
[Raw transfer]



APC_A_7(3DAY)
ACS2A_HUMAN
[Raw transfer]



COA_A_4(3GPC)
ACS2A_HUMAN
[Raw transfer]



AMP_A_3(3EQ6)
ACS2A_HUMAN
[Raw transfer]



AMP_B_5(3EQ6)
ACS2A_HUMAN
[Raw transfer]



PRX_B_10(1PG4)
ACSA_SALTY
[Raw transfer]



COA_B_6(3GPC)
ACS2A_HUMAN
[Raw transfer]



PRX_F_6(2P2B)
ACSA_SALTY
[Raw transfer]



GOL_B_23(3ETC)
?
[Raw transfer]



GOL_B_23(3ETC)
?
[Raw transfer]



GOL_B_22(3ETC)
?
[Raw transfer]



GOL_A_12(3ETC)
?
[Raw transfer]
45 HHSearch 94.1359% -57 - C2 -5U2A - ? -
1 PsiBlast_PDB 94.0458% -34 - C2 -5U2A - ? -
11 PsiBlast_PDB 79.0732% -15 - C2 -2P2F - ACSA_SALTY -
13 PsiBlast_PDB 78.7632% -12 - C2 -2P2Q - ACSA_SALTY -
30 PsiBlast_CBE 78.4032% -12 - C2 -5JRH - ACSA_SALTY -
21 PsiBlast_CBE 78.3632% -14 - C2 -2P2B 7.6 ACSA_SALTY
34 PsiBlast_CBE 78.2932% -15 - C2 -1PG4 5.8 ACSA_SALTY
35 PsiBlast_CBE 78.1332% -14 - C2 -1PG3 - ACSA_SALTY -
14 PsiBlast_PDB 78.1132% -14 - C2 -2P20 - ACSA_SALTY -
10 PsiBlast_PDB 78.0132% -12 - C2 -2P2M - ACSA_SALTY -
12 PsiBlast_PDB 77.9532% -13 - C2 -5JRH - ACSA_SALTY -
52 HHSearch 76.5933% -7 * C2 *3B7W - ACS2A_HUMAN -
4 PsiBlast_PDB 76.3233% -0 - C2 -3B7W - ACS2A_HUMAN -
51 HHSearch 76.2332% -24 - C2 -2P20 - ACSA_SALTY -
25 PsiBlast_CBE 76.0833% 1 - C2 -3EQ6 6.0 ACS2A_HUMAN
8 PsiBlast_PDB 75.6333% 3 - C2 -3EQ6 6.3 ACS2A_HUMAN
23 PsiBlast_CBE 75.3133% 2 - C2 -2WD9 - ACS2A_HUMAN -
26 PsiBlast_CBE 75.2533% 1 - C2 -2VZE - ACS2A_HUMAN -
3 PsiBlast_PDB 75.1233% 3 - C2 -2WD9 - ACS2A_HUMAN -
27 PsiBlast_CBE 75.0733% 0 - C2 -2VZE - ACS2A_HUMAN -
46 HHSearch 74.2031% -27 - C2 -3ETC 4.1 ?
36 PsiBlast_CBE 72.1031% 3 - C2 -3ETC 4.1 ?
18 PsiBlast_PDB 71.3931% 4 - C2 -3ETC 2.1 ?