@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP56: (2017-11-19 )
MFKRTFLFTIIAATLSTVYAAPLTKDNGAPVGDNQNSTTAGANGATLLQDVQLIQKLQRFGRERIPERVVHARGTGVYGEFVSTKDLSDLTLASLFKAGTKTPVFVRFSTVIHPKGSPETARDPHGFAVKFYTQQGNWDLVGNNLPVFFIRDAIKFPDFVHAMKPDPVTNVQDPNRIFDFLQSQPWSINMLTYVYSNLGTAESYRTLDGFGVHAFKLYNDKGEYKYVKFNWRSQQGVKGLNLEQVREVQGRDWSHLTNDMYKNIYAGNYPKWDLYIQVLDPKDLDKFDFNPLDATKIWPNELVPEFKVGTLTLNRMPKNFFQETEQSAFAPGNLIPGIEPSEDRLLQGRVFSYSDTQLYRLGVNYQQIPVNRPRVAVNNNNQEGFMNMGQTESHVNYEPSQIEPKPATEKARAVQTPLEGTVMQHAIQKQQPYKQAGDLYRSYSALEKKDLIRNLAADLGQVKNVETKTVMLSYFYKADADYGTRLAKAAQLKDE

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_B_5(1QWL)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWM)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]




HEM_A_4(1QWL)
CATA_HELPY
[Raw transfer]




HEM_B_5(1QWM)
CATA_HELPY
[Raw transfer]




HEM_A_3(7CAT)
CATA_BOVIN
[Raw transfer]




HEM_B_5(7CAT)
CATA_BOVIN
[Raw transfer]




HEM_A_3(8CAT)
CATA_BOVIN
[Raw transfer]




HEM_A_3(8CAT)
CATA_BOVIN
[Raw transfer]




HEM_B_5(8CAT)
CATA_BOVIN
[Raw transfer]




FMT_A_6(1QWM)
CATA_HELPY
[Raw transfer]




FMT_B_7(1QWM)
CATA_HELPY
[Raw transfer]




117 HHSearch 94.9864% -24 - C8 -1M7S - CATB_PSESY -
22 PsiBlast_CBE 94.9763% -22 - C8 -1M7S - CATB_PSESY -
1 PsiBlast_PDB 94.5463% -23 - C8 -1M7S - CATB_PSESY -
21 PsiBlast_CBE 94.3863% -24 - C8 -1M7S - CATB_PSESY -
23 PsiBlast_CBE 94.2163% -20 - C8 -1M7S - CATB_PSESY -
123 HHSearch 81.5253% 24 * C8 *4QOL - ? -
125 HHSearch 81.2839% -13 - C8 -1HBZ - CATA_MICLU -
111 HHSearch 80.8938% -14 - C8 -1GWE - CATA_MICLU -
124 HHSearch 80.3453% 24 - C8 -4QOQ - ? -
2 PsiBlast_PDB 80.1154% 27 - C8 -4QOL - ? -
28 PsiBlast_CBE 79.9554% 25 - C8 -4QOQ - ? -
129 HHSearch 79.9138% -13 - C8 -4B7F - ? -
42 PsiBlast_CBE 79.8854% 27 - C8 -4QOL - ? -
32 PsiBlast_CBE 79.7654% 26 - C8 -4QOP - ? -
29 PsiBlast_CBE 79.7354% 25 - C8 -4QOQ - ? -
4 PsiBlast_PDB 79.6654% 25 - C8 -4QON - ? -
44 PsiBlast_CBE 79.5554% 27 - C8 -4QOL - ? -
40 PsiBlast_CBE 79.4654% 27 - C8 -4QOM - ? -
39 PsiBlast_CBE 79.4654% 28 - C8 -4QOM - ? -
8 PsiBlast_PDB 79.4654% 28 - C8 -4QOR - ? -
126 HHSearch 79.2146% 21 - C8 -1QWL 12.8 CATA_HELPY
11 PsiBlast_PDB 79.0345% 17 - C8 -1QWL 12.8 CATA_HELPY
51 PsiBlast_CBE 78.1245% 18 - C8 -1QWM 12.9 CATA_HELPY
12 PsiBlast_PDB 78.0045% 16 - C8 -1QWM 12.9 CATA_HELPY
59 PsiBlast_CBE 77.6442% 3 - C8 -8CAT 11.9 CATA_BOVIN
52 PsiBlast_CBE 77.4745% 20 - C8 -1QWL 12.8 CATA_HELPY
15 PsiBlast_PDB 76.7942% 5 - C8 -7CAT 11.7 CATA_BOVIN
60 PsiBlast_CBE 75.8642% 5 - C8 -7CAT 11.7 CATA_BOVIN
16 PsiBlast_PDB 74.9042% 6 - C8 -8CAT 11.6 CATA_BOVIN
101 Fugue 66.9041% 38 - C8 -8CAT 11.6 CATA_BOVIN