@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP61: (2017-11-19 )
MNNNNSPIGMIDSGLGGLSLFKHIREALPNEDIIYFADSKYVPYGNRESDWIVSRTTHLISNLVAHGKCKAIVIACNTMTAVAVETIRAQINVPLISIEPAVKPAVAMTVSKHIAVLATATTVKGKNLKSLIETYAQDIKVSLVPCIGLAEKIETGKAHTAEVKDYLKNILAPLVEQKVDTIILGCTHYPFVSDTIQEIVGRDIQIIEPSEAVTAQLIRQLNQYHLSSESPNEGNHIIWTSSDPLEVADVTFSLLSEKLSVKAVEL

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DGL_A_3(2JFP)
MURI_ENTFA
[Raw transfer]




DGL_H_8(1ZUW)
MURI1_BACSU
[Raw transfer]




GLU_A_3(2JFO)
MURI_ENTFA
[Raw transfer]




DGL_A_4(2VVT)
MURI_ENTFA
[Raw transfer]




DGL_C_6(3OUT)
?
[Raw transfer]




DGL_E_5(1ZUW)
MURI1_BACSU
[Raw transfer]




DGL_F_6(1ZUW)
MURI1_BACSU
[Raw transfer]




TLA_A_2(2JFW)
?
[Raw transfer]




GLU_A_2(2JFN)
MURI_ECOLI
[Raw transfer]




SIN_A_3(3IST)
MURI_LISMO
[Raw transfer]




DGN_C_3(1B74)
MURI_AQUPY
[Raw transfer]




DGN_C_3(1B74)
MURI_AQUPY
[Raw transfer]




NHL_A_2(2OHV)
MURI_STRP1
[Raw transfer]




33 HHSearch 84.8632% -71 - C2 -2JFU - ? -
6 PsiBlast_PDB 82.4830% -68 - C2 -2JFO 4.4 MURI_ENTFA
36 HHSearch 81.5829% -65 - C2 -3IST - MURI_LISMO -
7 PsiBlast_PDB 81.4430% -68 - C2 -2JFP 4.2 MURI_ENTFA
23 PsiBlast_CBE 81.4031% -79 - C2 -5HJ7 - MURI_MYCTU -
15 PsiBlast_PDB 81.1231% -78 - C2 -5HJ7 - MURI_MYCTU -
32 HHSearch 80.9731% -82 - C2 -2OHG - MURI_STRP1 -
5 PsiBlast_PDB 80.0530% -70 - C2 -2VVT 4.4 MURI_ENTFA
13 PsiBlast_PDB 79.9030% -80 - C2 -2OHG - MURI_STRP1 -
12 PsiBlast_PDB 79.5630% -85 - C2 -2OHO - MURI_STRP1 -
3 PsiBlast_PDB 79.0735% -87 - C2 -2JFW 3.3 ?
48 Fugue 78.6532% -20 - C2 -2JFV - ? -
37 HHSearch 78.6329% -78 * C2 *2VVT - MURI_ENTFA -
20 PsiBlast_PDB 78.4729% -79 - C2 -2DWU - ? -
30 HHSearch 78.4029% -78 - C2 -2DWU - ? -
28 HHSearch 78.3028% -77 - C2 -2GZM - ? -
26 HHSearch 78.2431% -35 - C2 -5IJW - MURI_MYCS2 -
2 PsiBlast_PDB 77.9235% -86 - C2 -2JFV - ? -
29 HHSearch 77.8229% -80 - C2 -2DWU - ? -
14 PsiBlast_PDB 77.5830% -85 - C2 -2OHV 4.0 MURI_STRP1
9 PsiBlast_PDB 77.1631% -70 - C2 -3IST 3.8 MURI_LISMO
4 PsiBlast_PDB 75.4834% -77 - C2 -1ZUW 4.3 MURI1_BACSU
22 PsiBlast_CBE 75.1934% -78 - C2 -1ZUW 4.1 MURI1_BACSU
49 Fugue 74.4731% -79 - C2 -1B74 2.4 MURI_AQUPY
21 PsiBlast_CBE 73.6234% -69 - C2 -1ZUW 4.4 MURI1_BACSU
38 HHSearch 72.9130% -79 - C2 -3OUT 4.5 ?